| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3117 |
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| Symbol | |
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| ID | 4458562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3830793 |
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| End bp | 3833711 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703888 |
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| Product | putative rRNA methylase |
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| Protein accession | YP_847225 |
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| Protein GI | 116750538 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0109517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCGC GGAATACCGG ACCGGCGGTT CGTGAGTCGG AATGGAGCTC GGGTGGAACT
GAAAGCGGAA TAGAACAGGA TGCCACACCG GAAATGAACC TGCTCTCAAG GCTCGTGCAA
TCGTGGGTGG CCTGGGTTCT GCCCAGGCCA CGCCTTGTTT TGGGAATGGC TCTTGTCACT
GCGGCGGCCT CGCTTTTCCT GGCCGCGACA AAACTGCACG TCCAAACGGA TCAGCTGGAG
CTGATCTCCG CCAAGCACCC CTTGATTGCC CTTTCCAGGA AACTGGAACC TTTCAATTTT
GACGGCCGGG CGACGTTTTC CGTCGTGATC AAGGCTCCCA CGCCGCGGCA AGCCGTCGCC
TTCATCTCCG AGCTGGGGGC TCGTGTCGGA AAAGACGCCG CGCACTTCAG AGACGTGTTT
TACCGGGTGG ACCCCGACCT GTTCAAGAAA TGGGCCCTGC TTTACCTGGA CCGGAAGGAC
CTCCTGCAAA TCAGGGAAAG CCTTGAAGAA CATTCCAAAA TGATCGCGGA GTTGTCCGCG
GAGCCCGACC TGCTCGGATT CCTGAAGCTG GTGAACCGGG AGATGGCTTC GCGCATGGTG
GGAGAGCTGT TCACGGGCTT CCTCGACGAA GACCCTGCCG CGAAAAGGTC CAAGGGCAAA
GAGCCCATGG ACCTGGGCTT TCTCATCCAG ACGCTCAGCG GGCTCTCCAG CTATCTCGAC
GGCCATGACA AATACACCTC CCCATGGTCT TCATTTTTCA AGAGCAAGGC CTGGGATCTC
GATCAGGAAG GGTATTTCTG GGAGGCGAAC AAGCGCTTCG CGGTCTTGAT AGCCATTCCG
GCGAAGCTGG CCGTGGACGC GTTCAGTGAC ACTCAGATAT CTCTCGGCGC GCTCAGGCGG
CATGTTCGCG ATGTGAAAGC GCTCCATCCG GACGTCGAAG CCGGTGTGAC CGGCCAGGAA
GCCCTGAACA ACGATGAAAT GAGGACGGTC CTGGGGGATA TGAGCGTGGC GACGTGGCTC
TCCCTGCTCG GCGTGTTTGT GCTCCTGATC TTGTTTCTTC GGAGCCTGCG CAGATCCGTC
ATCGAGGTGG CGACCCTGAT CGTCGGCCTC TGCTGGACAT TCGGATGGAC TACGATTTTC
ATAGGCCACC TGAATATTTT GTCCGTCGTC TTTGCGCCTC TGCTGTGCGG GCTGGGCGTC
GACTACGGAA TTCACTGGAT GGCCAGGTTT GAGGAAGAGG AGCGTGGCGG GGCGCTCGAC
AACCGGGCGC TGACCGAAAG AGTGATGGAC CGGTCGGGCC CCGGCATTGT TCTGGCCGGG
CTGAGCGCGG CTTTTTCCTT CATTCCGTTC GTGTTGACCG GGTTCGCGGG CTTGATGGAA
TTGGGGCTGA TCACCGGCAT GGGCATTTTG CTGATTCTGC TTGCGGGTTT TACCGTTCTG
CCGGCCTTGA TGATTATTTT CGGAGGATGT CGCAAGAGAG CGGAGGTCGA TCCCGGTATT
CAAGCCGAGC GCGACCTGAT CCGGCTGGGG AGGGGTTCGG CGAGTCTCGT CCTGGCCGCC
GCGTTAGGGC TTTGCGTGTT GAGTCTCCTG GGGCTGCGGG GAGTGCGCTT CGAATTGAAC
CCTCTGCTTC TCCAGGCCGC AAACGCTGAA TCCGTGGTAT GGGAAAAGAC GCTGATCGAA
CAGTCGGAGC ATCAGTTGCT GTCGGCGGCC GCGTTCGCCT CATCTCCCGA GGAGACGTCG
GCCAAGGCGA AACGGTTCGA AGCTCTGCCG ACGGTCGCGA GCGTCAAGAC CGTATTCGGC
ATTCTTCCCG AGGACCAGGA GGAGAAGCTG CCCCTGTTGA GGGCCCTGCT GCCCCTGATA
CCCGAAATGC GCCCCTCCCG GGCACAGCCT GATCCCCCCT ACATTTCCGA CTTGATCGAG
ACGCTGGAAC GGATACGGTT CAAGCTGCAG GACGATCAGG CGGAAAAGTG GGGGGCCGAC
AAGCCCCTGG TGGAACAGAT GGCCACGGTC AGGAACCTGG GTGCAGGCAT CATCGGCGCT
TTGCGCGCTT CCCCGGAAGG TTTGCAGCGC CTTGCGGGGT ATCGGGCCAG GTTTACGGAC
GACCTGACCG AGACCTGGAG CTTCCTGAGG GACGGTGCGG CGGCGCGGCC CATGACCCTC
GATGATACGC CCAAGGTGCT CCGGGACCAG TTTCTCAGGG ACGGGCTGTA TCTGCTCCGC
GTCTTTCCCA GGCAATCCGT CTGGGAAGAG GAAGCCCTCG CCCGATTCGT GAAGGATGTG
ATGAGCGTCG AAAAGGACGT CGTCGGAGAT CCGGTCTCGC TCCATTTGTT CGCTTCGGCC
TACAAGAGGG CATGCATGCT CGCGTCCGCC TATGCCCTCG CGGCGATCTT CCTGCTGCTG
ATTCTGACTT TCCGGAACCT CAGGCACGCC GCGCTCGCGC TCATCCCCCT CGTTGTCGGA
ACGGTTTGGA CCGCGGGCAT AATGGGCGTT GCGGGGGTCG ACTTCAACCT GGCGAACAGT
ATGTTCATGC CCCTGGTTGT GGGAGCGGGG GTCGAGTACG CGATCATCAT CATCGCCCGC
TGGCGGGAGG GCGGGATGCA GCCCGGACAT CTGCCCTGGA GCACCGGGAA AGGGGTCATC
CTGGCCGCGC TCACCACCAC GGTGGGATTC GGGACGCTCA TGATTTCCCG TCACCAGGGG
ATTTTCAGCC TCGGTTTCGT TGCATGGTCC GGGAGCCTGT GTGTTCTGGC AACCGCTATT
TTCGTATTGC CGGCGATACT GGCGGGCATG AATCCGCCCG AAGGCATTCC GCTGAAGAAG
GAGAAAGACA ATGGTACGAT GGTTTCAAAT TGCCTTGATG TGCCTGTGCT CACTCGTGAG
TGCTCTTCCT GTGTCGGCGC AAACCGGAAG CGCCACTGA
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| Protein sequence | MRSRNTGPAV RESEWSSGGT ESGIEQDATP EMNLLSRLVQ SWVAWVLPRP RLVLGMALVT
AAASLFLAAT KLHVQTDQLE LISAKHPLIA LSRKLEPFNF DGRATFSVVI KAPTPRQAVA
FISELGARVG KDAAHFRDVF YRVDPDLFKK WALLYLDRKD LLQIRESLEE HSKMIAELSA
EPDLLGFLKL VNREMASRMV GELFTGFLDE DPAAKRSKGK EPMDLGFLIQ TLSGLSSYLD
GHDKYTSPWS SFFKSKAWDL DQEGYFWEAN KRFAVLIAIP AKLAVDAFSD TQISLGALRR
HVRDVKALHP DVEAGVTGQE ALNNDEMRTV LGDMSVATWL SLLGVFVLLI LFLRSLRRSV
IEVATLIVGL CWTFGWTTIF IGHLNILSVV FAPLLCGLGV DYGIHWMARF EEEERGGALD
NRALTERVMD RSGPGIVLAG LSAAFSFIPF VLTGFAGLME LGLITGMGIL LILLAGFTVL
PALMIIFGGC RKRAEVDPGI QAERDLIRLG RGSASLVLAA ALGLCVLSLL GLRGVRFELN
PLLLQAANAE SVVWEKTLIE QSEHQLLSAA AFASSPEETS AKAKRFEALP TVASVKTVFG
ILPEDQEEKL PLLRALLPLI PEMRPSRAQP DPPYISDLIE TLERIRFKLQ DDQAEKWGAD
KPLVEQMATV RNLGAGIIGA LRASPEGLQR LAGYRARFTD DLTETWSFLR DGAAARPMTL
DDTPKVLRDQ FLRDGLYLLR VFPRQSVWEE EALARFVKDV MSVEKDVVGD PVSLHLFASA
YKRACMLASA YALAAIFLLL ILTFRNLRHA ALALIPLVVG TVWTAGIMGV AGVDFNLANS
MFMPLVVGAG VEYAIIIIAR WREGGMQPGH LPWSTGKGVI LAALTTTVGF GTLMISRHQG
IFSLGFVAWS GSLCVLATAI FVLPAILAGM NPPEGIPLKK EKDNGTMVSN CLDVPVLTRE
CSSCVGANRK RH
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