Gene Sfum_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3045 
SymbolrnhB 
ID4458630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3749608 
End bp3750309 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content61% 
IMG OID639703817 
Productribonuclease HII 
Protein accessionYP_847154 
Protein GI116750467 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0381334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACGCA AACCCGTTGA AGCCCTGGCG ATGGACATGC TGCATTTCGA GAAGCAAGCC 
TATCGGCAGG GTTTTCAATT GGTTGCCGGA ATCGATGAGG TGGGACGCGG CCCGTTGGCC
GGCCCGGTGG TGGCTGCCGC AGTCGTGGTG CCGGCGGGTG TCCGTCTGCC GGGAGTTGCG
GATTCGAAGA AGCTTTCGGC CGGGCAGCGG GAATCCTGTT GTGAAGATAT CCTGTCGTGC
GGTTGCGATG TGGGTATCGG GCGTGTCGAA CCCTCTGAAA TCGACCGGGT GAATATCCTG
CAAGCCACTT TCCAGGCGAT GATCGCGGCC GTTGCCGGTC TGAAAACCCC TCCGCACTGT
CTCCTCATCG ACGGCCCTTA CGAACTGCCT CTGTTCATCG CGCAAAAAGG CATTCCCCAG
GGGGATGCGA AGTCCCTGTC CATCGCCGCG GCGTCCATTG TCGCCAAGGT GCATCGTGAT
CGCCTCATGT GTGAATACCA CCTGAAGTAC CCCGTCTATG GTTTCGATCG AAACAAGGGC
TACGGGACCG CACGGCATCT GGATGCTTTG CGCAGGTACG GGCCGTGCCC GATTCACCGC
TTGAGTTTCG GCGGCGTGCG CGCGTCGGAG GGAGAAGGGC TTGAAACCGC CGCCGGAAGA
CAGTCATCGG AAGGGAAGAA AGGGCGAAGG CCTCGCGGCT GA
 
Protein sequence
MGRKPVEALA MDMLHFEKQA YRQGFQLVAG IDEVGRGPLA GPVVAAAVVV PAGVRLPGVA 
DSKKLSAGQR ESCCEDILSC GCDVGIGRVE PSEIDRVNIL QATFQAMIAA VAGLKTPPHC
LLIDGPYELP LFIAQKGIPQ GDAKSLSIAA ASIVAKVHRD RLMCEYHLKY PVYGFDRNKG
YGTARHLDAL RRYGPCPIHR LSFGGVRASE GEGLETAAGR QSSEGKKGRR PRG