Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2976 |
Symbol | |
ID | 4458701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3678245 |
End bp | 3679171 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639703748 |
Product | RDD domain-containing protein |
Protein accession | YP_847085 |
Protein GI | 116750398 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0648796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTG TATGCCCGAC GTGTGAGACC GTTCACCACA TCAAAGACGG CCGAGTTCCC CGCAAGAAGG CTACCGGCAA GTGCACGCAA TGCGGCGCAC GTCTCATCAT CGATCCCGGA CAACCGGCGC CCGGTGTGGA AGCGGCCTTG CCGTACGCCG CAAGCCGAAA CGTTCCAGTT GAAAAGTCCC ATGTGCCCGG CAACCCCAAA ATGACGGCTG CGCCCGACGC GGACAGGCCC CTCCCGGCGC CTGTCCGAGA TAAGCATCTT TCCGCGCATG GCGGGGACAA ACCGGCTCCG GCAGGCAACA TGAACAAACC GTTTCGCGCA GGCGGCAGGG ACAGGCCGAT TCCCCCTCAA CGCGCGAAAA GGCGTGTTCC CGCGCCGAAA AGGCCCATCC GGAGCGACCT GGGGAAAGCC GGTTCCGCGT GGAGGCGCAT CGTCGCCTTT GCACTGGATA TGGGCCTGGT CGCAGGCGCC ACCTTCGCGA TGACCATCGT GCTGCCCGCA TCGTTTCAAA TCCCCGGACT GCCGGCGCTC GGGCTCTTTG GAGCGCTTGC AATGCTGTAT TTCGGCATCC TTCAGAGCTC TCCGGGAAAG GGACAGACCT TCGGAAAATA CATCACCGGG ATCCAGGTGC TCGACGAAGA GGGCCTTCCG CTTTCCTTCT TTCGCTCCGT CGTCAGGTTC ATGTTCACGG CCCTGCCTGC GTGCCTGGCC GTCCTGGCGC TCCCTCCCAA AACGGGCGCC TCGACGATCG ACGCCACCTT GACGGCCGCT TTCCTGGGAA TCTGTCTTTT CGACGTCTAT CTCTTTCTTT TCGGTGGGCC CATGGGGCAG TCCCTCCACG ACATGATGCT GGGCACATAC GTGGTGGCCG CCCCCAAAGC GGGGCGAGTA GGCCGGGAAC CCCTCTGGAA CGCATAG
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Protein sequence | MRIVCPTCET VHHIKDGRVP RKKATGKCTQ CGARLIIDPG QPAPGVEAAL PYAASRNVPV EKSHVPGNPK MTAAPDADRP LPAPVRDKHL SAHGGDKPAP AGNMNKPFRA GGRDRPIPPQ RAKRRVPAPK RPIRSDLGKA GSAWRRIVAF ALDMGLVAGA TFAMTIVLPA SFQIPGLPAL GLFGALAMLY FGILQSSPGK GQTFGKYITG IQVLDEEGLP LSFFRSVVRF MFTALPACLA VLALPPKTGA STIDATLTAA FLGICLFDVY LFLFGGPMGQ SLHDMMLGTY VVAAPKAGRV GREPLWNA
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