9 homologs were found in PanDaTox collection
for query gene Sfum_2976 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_2976  RDD domain-containing protein  100 
 
 
308 aa  620  1e-176  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0648796  normal 
 
 
-
 
NC_008554  Sfum_3018  RDD domain-containing protein  100 
 
 
308 aa  620  1e-176  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.792244  normal  0.129954 
 
 
-
 
NC_011145  AnaeK_3673  RDD domain containing protein  31.58 
 
 
323 aa  64.7  0.000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09620  RDD domain containing protein  36.61 
 
 
302 aa  59.7  0.00000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2847  RDD family membrane protein  28.82 
 
 
329 aa  51.2  0.00002  Burkholderia sp. 383  Bacteria  normal  normal  0.1745 
 
 
-
 
NC_013946  Mrub_1449  RDD domain-containing protein  34.04 
 
 
158 aa  46.6  0.0005  Meiothermus ruber DSM 1279  Bacteria  normal  0.413718  normal 
 
 
-
 
NC_008312  Tery_2608  RDD domain-containing protein  34.48 
 
 
456 aa  45.8  0.001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.107491 
 
 
-
 
NC_009380  Strop_4251  RDD domain-containing protein  31.21 
 
 
313 aa  44.3  0.003  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0800108 
 
 
-
 
NC_011146  Gbem_1712  MJ0042 family finger-like protein  28.7 
 
 
446 aa  43.1  0.006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
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