Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2960 |
Symbol | |
ID | 4458720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3657438 |
End bp | 3658814 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639703732 |
Product | amidohydrolase |
Protein accession | YP_847069 |
Protein GI | 116750382 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGATA TATCGCCCGC ACGATCAAAC CCTGAACCCG GCGGGACCCC ACCTCGCGAG GTCGATTGGC TGCTTGCGGA TGCGGACTGG GTTCTGACCT GCGATGCAGC CATGAGCGCG ATCCCTTCGG GCGCGGTCGC CATCGAGGGC GACACCCTTG TCGGGGTCGG GTCATCGCGG GACATCCGGT CACGGTTCAG AGGCCGCAAC GAAATGTGTC TCAAGGGCTG CCTCGTCGCC CCCGGTCTCA TCAACACCCA CGGGCACGCG GCCATGAGCT GCTTCCGGGG GCTCGGCAGC GATCTTCCCC TGGAACGCTG GCTCACCGAG GTCATTTTCC CGGCGGAGGC TTCTCATGTG ACGCCGGAAT TTGTCCATTA CGGGACGCTG CTGTCGTGCA TCGAGATGCT CAAAGGCGGA ACAACGACAT TTTGCGACGG GTATTTCTTC GAGGAAGAAG CCGCGCGGGC GGCACAGGAA TCGGGTATCC GCGCCGTTCT CGGCCAGGGC ATACTGGACT TTCCCACTCC CGACCAGCCC GATCCGTCGC GGTTCGCGGA ACGCGCCGAA GCTTTTCTGC GCTCCTTCCC CCCGGGGGAG AGCCGCCTGC AACCGTCATT GTTCTGCCAT TCGATATCCG CCTGCGGGCC GGAAACCCTG CGGCGGGTCA AATCCATCTG CCGGGAAAGC GGCATCCTGT TCCAGATTCA CCTCTCCGAA ACGGCATCGG AGGTGGAGCA GGTGATCGGC AGGTACGGAA CCAGGCCCGT CCATCACCTG GACCGCCTCG GCATCCTGGA TGACCGAACC CTTTGCGCCC ATGCCGTCTG GCTCGACCGG GAGGAAATCG ATATCCTGGC TGCGCGGGGC GCGGGCCTCT CCCACAACGA GGAAAGCAAC ATGAAGCTCG CTTCGGGAAT CGCTCCGGTT CCGGAGCTGA TCGGCGCGGG CGTCCGAATC GGCCTGGGCA CCGATGGCTG TGCCAGCAAC AATGACCTGG ATCTCTTTTC CGAAATGGAC ATGGTTGCAA AGAGCCACAA GGCGTTTCGA AAGGACCCGA TGGCCTGTTC GGCCGCGGCC GTTCTCCGAA TGGCCACCCG AGGGGGCAGC GCCGTTCTGT CGCACCAGGG GATGACCGGC GGTATCGAGG AGGGCTGGAA AGCGGACCTG ATCGTCATCG ACCTCGATCA ACCCCACCTT ACGCCTCTCT ATGACCCCAT CTCCCACCTG GTCTATGCGG CCGGCGCGGG GGACGTCCGC CATGTTTGGG TCGACGGCCG CCTGGTGGTC TCGAACGGGA CAATCCTGAC CCTGGACGAG TCTCGGATCA TGAAAGAAGT GCTGAGAATC GCCGGGAAGA TCGCCGGGGC GTCCTGA
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Protein sequence | MSDISPARSN PEPGGTPPRE VDWLLADADW VLTCDAAMSA IPSGAVAIEG DTLVGVGSSR DIRSRFRGRN EMCLKGCLVA PGLINTHGHA AMSCFRGLGS DLPLERWLTE VIFPAEASHV TPEFVHYGTL LSCIEMLKGG TTTFCDGYFF EEEAARAAQE SGIRAVLGQG ILDFPTPDQP DPSRFAERAE AFLRSFPPGE SRLQPSLFCH SISACGPETL RRVKSICRES GILFQIHLSE TASEVEQVIG RYGTRPVHHL DRLGILDDRT LCAHAVWLDR EEIDILAARG AGLSHNEESN MKLASGIAPV PELIGAGVRI GLGTDGCASN NDLDLFSEMD MVAKSHKAFR KDPMACSAAA VLRMATRGGS AVLSHQGMTG GIEEGWKADL IVIDLDQPHL TPLYDPISHL VYAAGAGDVR HVWVDGRLVV SNGTILTLDE SRIMKEVLRI AGKIAGAS
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