| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2910 |
|---|
| Symbol | |
|---|
| ID | 4458772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3589429 |
|---|
| End bp | 3591246 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639703684 |
|---|
| Product | dynamin family protein |
|---|
| Protein accession | YP_847022 |
|---|
| Protein GI | 116750335 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.518789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.400566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACT ATGCCCGGAT GCGCGATGAT CTTTGTGAAG TGGCCGAACG CCTGGACAGC
GCGGTGCGTG AAGAGACGGT GCGGCACCTC GACGCCCTGA GAGCGAAGCT CCGGGAGGAG
GCGTTCAACC TGGTAGTCCT CGGCCAGTTC AAGCGAGGGA AATCCACGTT CATCAACGCG
CTGCTCGGCG CGAACATCCT TCCCACCGCC ATTGTGCCCC TCACTTCCGT CGTGACCATC
CTACGATTCG GCCCGGAGCT CAAGGTGGAA GTCCGTTTTC TCAATGAGAG CCGGGTGGAA
ATCAATCTAT CGGAGCTTCC CGCCCACATT ACCGAACGCG AAGACCCGGA AAACCGCAAA
GGCGTGAAAG AGGTCACCGT TTACTATCCC TCCGAGTACC TGAGAGGAGG AGTCCGCATC
ATCGACACTC CGGGAGCGGG TTCGGTCTAC GCCCACAACA CCGACGTGGC CTACAATTTC
CTGCCCCAGG TGGATGCGGG AGTCTTTGTC GTATCCGCCG ACCCGCCCCT GTCCGGCAGT
GAACACCGGT TTCTCAAAGA CGTGCGCGGC TATGTCGACA AGCTTTTCTT CGTGTTGAAC
AAGATCGACC AGGTGAGCGA GGATGAGCGC AAGGAGGCTT TGGACTTCAC CGTCCGTATC
CTCGAGGACG ATATCGGAGA AGGGAAAGTG AAGATCTACC CGGTCTCGGC CCGCTGGGCG
CTGGAAGGCA AGAAAACGGG CGACGGCGGC CTGCTTGAAA GGAGCCTTCT CCCCTATTTC
GAGAAACAGT TGCAGGAGTT TCTGGTTCAT GAAAAGGGGC GGGTCCTTTT GCAGTCCGCG
GTCAACACCC TGATGAAGCT GATGTCCGAT GAAACCATCT CGTTTCAGCT CGAACAGGAA
GCCATCAAGC TGCCCCTGCA GCAGCTCACG GGGAAGATCA ATCAGTTCGA AACCGAAATG
CGAACGATCG AGAAAGACCG GGAAAACAAC CGCTACCTCT TGAAAGGCGG CCTCGGCAGG
ATTGTCTCCG GTCTGGACGA AAGAATCGCC GAGTTCAGGA AAGAACAGGT TCCCGCGCTG
CAGACCAGGA TGGAGAAGGA ATATGAACGG CTCGCGAACG GCCGGACCGG CGGTTTGCGC
GACAACCTCG AGAAGGCCGT TTTTGAAGAT ATCCGTGCGA CCTTCAACGG CTGGCGCGGG
CAACTCACCG AGAATCTTTC CCTGCAGCTG GAGGCGGCGC ACCGGGAATT CGCCTCCCGC
GTCAACGAGC TTATCGAACG CATTCTGACG CTCACGAGCA GCATCTTTGA GCTGAAGCTG
CAACCGTTCA CTTCCGTCGA GGGCCTGAGC AGGAAGAGCG ATTTCTACTT TCTTCTGAAA
GACGATCCGG TGGGGCTCGA GCTGATACAG ATCGCCGTGA CCTCGGCATT GCCCGGGTTC
GTCGCAAAAA AGCTGATCTT CAAGAACATG AGGACGGCGG TGGCGGAACT CGTGGACAGG
CATTGCGGGA GAGTGCGCTA CGACCTGGTC AACCGGATGA CTCAAGCCGT CAAGGATTTC
GAGAATGCCT TGAATTCAAA GCTCGACTCC ACGCTCGAAG GAATCCGCAT CTCGTTTCAA
AAGGCCCTGG CACTGCACGA GAGCGGCAAA ACCAACGCGG ACAAGAGCCT TGGCGATCTT
TCCAGGAAGC TGGACTCGCT TTCGGGGATT CAGGATGCGC TTCGGTCCTA TTCGATGGTG
TTGGACGGAG GGGACAAGGC TGATGTGTTT TCGTCTCGCC GGGAATCATC GGGAAGGGGC
ATGTCAAACC CGGGTTGA
|
|---|
| Protein sequence | MFDYARMRDD LCEVAERLDS AVREETVRHL DALRAKLREE AFNLVVLGQF KRGKSTFINA
LLGANILPTA IVPLTSVVTI LRFGPELKVE VRFLNESRVE INLSELPAHI TEREDPENRK
GVKEVTVYYP SEYLRGGVRI IDTPGAGSVY AHNTDVAYNF LPQVDAGVFV VSADPPLSGS
EHRFLKDVRG YVDKLFFVLN KIDQVSEDER KEALDFTVRI LEDDIGEGKV KIYPVSARWA
LEGKKTGDGG LLERSLLPYF EKQLQEFLVH EKGRVLLQSA VNTLMKLMSD ETISFQLEQE
AIKLPLQQLT GKINQFETEM RTIEKDRENN RYLLKGGLGR IVSGLDERIA EFRKEQVPAL
QTRMEKEYER LANGRTGGLR DNLEKAVFED IRATFNGWRG QLTENLSLQL EAAHREFASR
VNELIERILT LTSSIFELKL QPFTSVEGLS RKSDFYFLLK DDPVGLELIQ IAVTSALPGF
VAKKLIFKNM RTAVAELVDR HCGRVRYDLV NRMTQAVKDF ENALNSKLDS TLEGIRISFQ
KALALHESGK TNADKSLGDL SRKLDSLSGI QDALRSYSMV LDGGDKADVF SSRRESSGRG
MSNPG
|
|---|
| |