Gene Sfum_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2860 
Symbol 
ID4458826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3529641 
End bp3530195 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content58% 
IMG OID639703634 
Productheat shock protein Hsp20 
Protein accessionYP_846972 
Protein GI116750285 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.793853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA AAAAGCTGGC ACCCTGGAAC TGGTTCAAAA AGGAAGAGGA GCAGCAGTCC 
GCAAACCTTC CCGTGCAGCG CTACGACCAG CCGCGCCACG ACAACCCCGT CGCGCGGTTT
CACCAGGAAA TCGACCGGAT GTTCGACCAT TTCTTCCGAG GGTTCGGTTT TCCGTCGATG
GGGGTGGGCA GGGAAATCGC TCCGATGTCG GGCACCGAGT GGCTGAAGCC CATGCTGGAT
ATTGCCGCCG GCGACAAGGA GTACACGATC ACCGTCGAGC TGCCGGGGGT GGACGAAAAG
GACGTTCAGC TGGAGCTGCA GGAGGATACC CTGATCATCA AGGGTGAGAA AAGGCAGGAG
AAGGAAGAAA AGGATAAGAA TTACTACCGG ATGGAGCGCT CCTACGGCTC CTTCCAGAGG
GTACTGTCCC TGCCCGAAGA TGCGGAGCAG GAGGGCATCA ACGCCGCCTA CAAACACGGT
ATCCTGACGA TCACCATTCC CAGGAAGGCC CGGGCGGTCG CGAAGCCGAA GCAGGTCGTG
ATCAACAGGC AATGA
 
Protein sequence
MDFKKLAPWN WFKKEEEQQS ANLPVQRYDQ PRHDNPVARF HQEIDRMFDH FFRGFGFPSM 
GVGREIAPMS GTEWLKPMLD IAAGDKEYTI TVELPGVDEK DVQLELQEDT LIIKGEKRQE
KEEKDKNYYR MERSYGSFQR VLSLPEDAEQ EGINAAYKHG ILTITIPRKA RAVAKPKQVV
INRQ