Gene Sfum_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2848 
Symbol 
ID4458813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3510150 
End bp3510560 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content59% 
IMG OID639703622 
Producthistidine triad (HIT) protein 
Protein accessionYP_846961 
Protein GI116750274 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATT GCATATTCTG CCAGATCATC CAGGGACAAC TGCCCTGCGC GAGGATTTAC 
GAAGACGATC GCGTGTTGAG CTTTCTCGAC ATCAACCCGG TCGCCCGCGG TCATGCGCTC
GTCGTTCCCA AGCGGCACTA CAGCACCCTC TTTCACATCC CTCCCGAAGA CCTGGAAGCG
TGCATCGTGG CTGCAAAAAG AGTCGGGGCC GCCGTTTTCA AGGGGGTTGG GGCCTCGGGG
CTCAACGTGC TTCAGAACAA CTACCGCGCC GCCGGACAGT TGATCGACCA CTTTCATCTT
CACCTCATTC CGCGGCACGC TCACGACGGT TTTTTCACTG CGTGGCCGGG CAAGCCCTAT
CCGACCGGCG AACTGGACAG GATCCTGCGA AAGATCCTGC CGGAGGTGTG A
 
Protein sequence
MLDCIFCQII QGQLPCARIY EDDRVLSFLD INPVARGHAL VVPKRHYSTL FHIPPEDLEA 
CIVAAKRVGA AVFKGVGASG LNVLQNNYRA AGQLIDHFHL HLIPRHAHDG FFTAWPGKPY
PTGELDRILR KILPEV