Gene Sfum_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2696 
Symbol 
ID4458995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3336408 
End bp3337031 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content60% 
IMG OID639703467 
Productelectron transport complex RsxE subunit 
Protein accessionYP_846809 
Protein GI116750122 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCCA CAACCAAGAC CAGCTCTCAA TTGGTGCTCG ACGGCATCTT GAACGAGAAC 
CCCATCTTCC GCCTTGCGCT TTCCATGTGC CCTGCGGTCG GAATCAGCAC AACCATAATG
AACGGGCTGC TGCTGGGGGT TGCGGTCCTT TTCGTCCAGG TGTTTTCGAG CTGCACCATC
GCGGCCGTCA AGAATTTCAT CCACCCCAGG ATCCGCATCC CCACCTACAC GCTCACCATC
GCCACCTGGG TGACGGTGAT CGACCTGGTG CTCGCGGCCT ATGTGCCGGG GGCATACAAG
CAGATGGGCA TCTTCGTCAA GCTCATCGTC GCTTTCGCCA TAATCACCAT GCGGCTCGAG
ACATTCGCCT GCAGGAACGC CGTAAGCCCG TCCTTCTGGG ACGCGCTGGG CATGGGGCTG
GGCTTCATGT TCGGCATGGT GAGCATAGGG TTCGTCCGCG AGCTCCTCGG CCAGGGCACC
CTCCTGGGGT TCGACGTCCT CGGCTTCCAG CCCCTTCTGT TCTTTGCGCT GCCCGCCGCC
GGCTTCTTCT GCGTGGGGAT CATGATGGCC ATCTTCAACT ACGTTGAGCT CGTCTACAAT
CGAAGGAAGG CGAAAAACCG ATGA
 
Protein sequence
MPATTKTSSQ LVLDGILNEN PIFRLALSMC PAVGISTTIM NGLLLGVAVL FVQVFSSCTI 
AAVKNFIHPR IRIPTYTLTI ATWVTVIDLV LAAYVPGAYK QMGIFVKLIV AFAIITMRLE
TFACRNAVSP SFWDALGMGL GFMFGMVSIG FVRELLGQGT LLGFDVLGFQ PLLFFALPAA
GFFCVGIMMA IFNYVELVYN RRKAKNR