| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2638 |
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| Symbol | |
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| ID | 4459042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3258795 |
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| End bp | 3262535 |
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| Gene Length | 3741 bp |
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| Protein Length | 1246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703409 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_846751 |
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| Protein GI | 116750064 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.406251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTTGGA TTGGCTGCCT GCATCCTGGT GGACGTCCTT ACTCTGGTAC GTTGAGAGCC
CGCTCGAAGT CCACCGTCGG TCAAGGGGCC GTCTCCTTTT CGGCCGGGAT TGCGTTCGCC
CTGCTTCTTT CCTTCTCCGT CCCGCTTTTT TCAGCCTTCG CCGCCGTGGA CACCCCCAGG
ATCCTGGTGA TCCATTCCTA CAATTCGAAC ACCAACTGGA CCTCTGAAAT CGAGAAAGGG
ATGAGGGAGG CCTTGAGCGA GCAGTACGGC CCCGTCAGCT TCCAACTGGA ATTCATGGAC
ACAAGACACT ATTCCGGGGC CGACTATCAC GACAGGTTGA AGAGCCTTCT CACCTATAAG
CTGCGGGGGC GGAGTTTCGA CATCGTGCTC ACGTCGGACA ACGATGCCTT CGCTTTTGTC
CGGGCAAACA GAACGCAGCT CTTCCCGACC GTGCCCGTGG TTTTCTGCGG CGTCAACAAT
TTCACCCAGT CCATGCTCGC CGGTGTCACC GGGATGACCG GAATCGCCGA GGACGTTTCG
GTTGGCGAGA CCCTCGACAT AGCCCTTGAA CTGCATCCCG GCCTGAAGCG GATCGTCGTC
ATCGGGCTCA CCACCATAAC GGCGGACAGG GCCAACCGGG AAGCTTTCGT CGAGCAGGTC
CGCACCGGCT ACGAACGGTT GGAATTCGAT TTCTGGGACG CCGTTGACAC CGACGAACTG
GCGAAGCGCC TGCCTCTTTT GGGTCCGGAC ACCATCGTGG TCATCAACGG GATCATCGCC
GAACCGGACG GCCGAATGCT TGGATTTGGG GAAACGACCG GCTTCATCCA CGCCCGTTCG
TCCGTCCCCC TTTACACCCT CTGGGACGTA TACCACCATG GGACCCTCGG GGGCAAAATG
GTGACGGGAC GCATGCAAGG CAGGCTTGCC GGAGGCTTGG CCGCGCGAAT ACTGAAAGGC
GAGGACCCGG ATAAGATTCC CGTCGTACAT TCCACATCGG CCAATCAATA CATCTTCGAT
CTGAACGAGC TCTCCCGCTT CCGGATCTCC GAGGACAGGC TCCCCTTGGA CCGCGTCATC
ACCAACAAGC CGAGTCCCTT CTACATGGTC GACAAGACCT TCCTCCGCAC GGGAATCGCG
GCGTTTCTCC TCCTGGCTTG TATCGTCGTG CTTCTCGCGG TCAACATCGC AGCCCGCAAG
AAGGCGGAGA AATCCCTCAT CGAAGGACAG CGATGGCAAA AAGCCCTCTT CGACAACATC
ACCGACTTCG TCTGGATGAA GGACCTGCAA GGGCGGGTTC TCGCCTATAA CGAGTCCTTT
CGCCTGGCCT TCCGCTGGGA ACCCGGAGCG GTTTTGGGGA AGACCGGCTA CGACCTGTTC
CCGGCGAACA TTGCGGACAG AATAAGGACA AACGACGAGG ACGTCATTGC ATCCCGCGTC
CGCGGGCACC TTGAAGAAAG CTTTGAAATG CCGGGCGGAG AGACCAGGTG GTTCGACACG
ATCAAGACCC CGGTTTTCGA CAAATCGGGG CGAGTGATGG GCACGGTGGG AAGCGCCCGC
GACATCACGG AACGCAAAAG AGCGGAAGCC GCGCTGGCCC GCAGCGAGAA CAAGCTGAAA
AGGATCATCG AGGATTCGCC CATCCCCATA TGCTGGGCGG ACAAAGAGTG CCGCGTGGAG
TTTGTGAACC AGGCGTTCAT CGATCTCTTC GGCTACCGGA TGGAAGATAT CCCCACTGCG
GAGGAGTGGT TCCGCCGCGC CTACCCCGAC GAACCTTTCC GGAAGGAAGC GGAGGCGCGG
TGGAGAGCGC GGATCGCGGC CGCCAGGTCC GATGGGACTA AGATGCGCCC CACTGAATGC
AACGTGACCT GCAAGGACGG GTCCGTCCGA ACGGTCGAGA TCATGAACAC GCTGCTGGAA
GACGCGATCC TGGCGGTTTT CAAGGACACG ACCGAGCGCA AGCGCGCGGA AGCCGCGCTT
CATGAGAGCG AACAGCGGTT CAAGACCCTC GCCGAAGCCT CTTTCGAAGG GATCGCGCTG
ACCGATAACG GCATCCTTGT GGACCTCACC GAGCAGTTCG CGAACATGCA CGCATGCGAT
CGCAACGAGC TTCTCGGCAG AAATGTCCTG GAATTCGTCT CGCCGGAATC CCGGGATCGG
GTGGCGCGCG CGCAGGCATT GGACGAAACG GGACCCTACG AGTTCAATGC GTTGCGAAAG
GACGGTTCCA CCTTCCCGGT CGAGGTTCGA GCCAGGTCGA CCCTGATCGG GGGCCGCCGC
CTGCGGCTGT CCGCCTCGCG GGACATGACG GCCTACAAAA CTGCCGAGGA AGCGTTGCGC
AGCAGCGAGG AACGATTTCG CCTCATCACC GAGAACATGG GGGATCTCGT CTGCCAGGCC
GATCCCATGG GCAGGTACCT TTATACCAGC CCGTCGTTCC AGCGCATCCT GGGCTACGAT
GGGAACGCCC TGCTCGGAAC GTCCGTGTTC GAACAGATCC ACCCCGACGA CCGCCGGGAA
ATCATGGAAC GATTCAGGAA AGGTTTCCAG ATGGGCCAAG CGCGGGAAAC CGAATACCGC
AGTAGACATG CAAACGGGCA GTACCTGTGG CTCCGGAGCA CCGCCAATTT CGTGTACGAT
TCGGAGGGGA ACCCGCTGTT CGCCGTGATC GCGACCCGCG ACGTGACCGC GAGGCGGGAG
GCGGAAGCGG CTCTCCTCGA GTCGGAAACC AAGTTCAGGA CCCTCAGCGA AAATTCCGCC
GCGGCCGTTT TCATTACCCA GGACGATTTG TTCGTTTACG CCAATGCGAC ATTCCAAAGG
CTGTCCGGAT ACGACAAGGA AGATCTGACC CGACTGAAAT TCTGGGAAAT CGCCCATCCG
GATCTGCGCC AGACGATCAG AGACCGGGGC TATGCCCGCT GGCGCGGGGA GAACGAACCC
ACTCGTTACG AAGCCGTCAT CCTGACGAAG GACGGTAAAG CAAAATGGGT CGATGTGAGC
GCCACCCTGA TCGAATACCG CGGAAGGCCC GCGACCCTCG GAACCGGCAT CGACATCACC
GAAAGCAAGC AGGCGGAACA GCAGATCAAG GCCGCGCTGG AGGAGAAGGA GGTTCTCCTT
CGCGAGGTGC ATCACCGGGT CAAGAACAAC CTGCAGGCCA TCATCTACCT CATCGACAGC
GAGACCGACC AGACCCGGGA CCCGCAGGTC TATCAGTTTC TGAAAGAACT GGAAGAACGC
GCGCGCACCA TGGCTCTCGT CTACGAACAG TTGTACCAGT CGGACAACCT GGCTCACATC
GAGATGGTGC AGTACCTGAG CGATCTCGGT TCGAACCTGG TGCAGGCCTT CGGAGCCGGA
CGCGACATCC CGGTCGCCGT GGAGCCGGGG AAGATATGGC TCGACGTGGA GATCGGGATG
CCGTGCGGGC TGATCGTGAA CGAGCTCGTG ACGAACGCCC TGAAACATGC GTTCCCGCCG
GAAAAACACG AACGAGGCGA AGTTCGTGTC GCACTCCATA AAGAAGACGG CCGGTACACG
CTCAGGGTCA GCGACAACGG CGTGGGCCTC CCCCCGGAAT TGCGCTGGCG CGAAGCCCGC
TCCCTGGGTC TGCGGCTCGT CAACCTCTGG GCCACCCACC AGCTCGGCGG AACCATCTCA
GTGGAAGGCC CGCCGGGAAC GACCTTTACC GTTACCTTCA CGGAAAGGAA GAGGAGGGAG
TTTCTGAATG GACGCGGCTA A
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| Protein sequence | MSWIGCLHPG GRPYSGTLRA RSKSTVGQGA VSFSAGIAFA LLLSFSVPLF SAFAAVDTPR
ILVIHSYNSN TNWTSEIEKG MREALSEQYG PVSFQLEFMD TRHYSGADYH DRLKSLLTYK
LRGRSFDIVL TSDNDAFAFV RANRTQLFPT VPVVFCGVNN FTQSMLAGVT GMTGIAEDVS
VGETLDIALE LHPGLKRIVV IGLTTITADR ANREAFVEQV RTGYERLEFD FWDAVDTDEL
AKRLPLLGPD TIVVINGIIA EPDGRMLGFG ETTGFIHARS SVPLYTLWDV YHHGTLGGKM
VTGRMQGRLA GGLAARILKG EDPDKIPVVH STSANQYIFD LNELSRFRIS EDRLPLDRVI
TNKPSPFYMV DKTFLRTGIA AFLLLACIVV LLAVNIAARK KAEKSLIEGQ RWQKALFDNI
TDFVWMKDLQ GRVLAYNESF RLAFRWEPGA VLGKTGYDLF PANIADRIRT NDEDVIASRV
RGHLEESFEM PGGETRWFDT IKTPVFDKSG RVMGTVGSAR DITERKRAEA ALARSENKLK
RIIEDSPIPI CWADKECRVE FVNQAFIDLF GYRMEDIPTA EEWFRRAYPD EPFRKEAEAR
WRARIAAARS DGTKMRPTEC NVTCKDGSVR TVEIMNTLLE DAILAVFKDT TERKRAEAAL
HESEQRFKTL AEASFEGIAL TDNGILVDLT EQFANMHACD RNELLGRNVL EFVSPESRDR
VARAQALDET GPYEFNALRK DGSTFPVEVR ARSTLIGGRR LRLSASRDMT AYKTAEEALR
SSEERFRLIT ENMGDLVCQA DPMGRYLYTS PSFQRILGYD GNALLGTSVF EQIHPDDRRE
IMERFRKGFQ MGQARETEYR SRHANGQYLW LRSTANFVYD SEGNPLFAVI ATRDVTARRE
AEAALLESET KFRTLSENSA AAVFITQDDL FVYANATFQR LSGYDKEDLT RLKFWEIAHP
DLRQTIRDRG YARWRGENEP TRYEAVILTK DGKAKWVDVS ATLIEYRGRP ATLGTGIDIT
ESKQAEQQIK AALEEKEVLL REVHHRVKNN LQAIIYLIDS ETDQTRDPQV YQFLKELEER
ARTMALVYEQ LYQSDNLAHI EMVQYLSDLG SNLVQAFGAG RDIPVAVEPG KIWLDVEIGM
PCGLIVNELV TNALKHAFPP EKHERGEVRV ALHKEDGRYT LRVSDNGVGL PPELRWREAR
SLGLRLVNLW ATHQLGGTIS VEGPPGTTFT VTFTERKRRE FLNGRG
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