Gene Sfum_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2523 
Symbol 
ID4459170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3108101 
End bp3109114 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID639703287 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_846636 
Protein GI116749949 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTGA AACAAGTGGC CGAGGCGGGC ATACACCTTC TGGTGGGTTT CCGGGGAACG 
ACTTTCCAGG AACAGCTCAA ATCACTCATC GATGAGTTCG GAATCGGCGG GATCGTGCTT
TTTCGGCGGA ACATTCAAAC ACCGGAACAG CTGAGGAGCC TGTTGGAGGA GATGCAGAGC
CACGCGCGGC AGGTTCTCGG CCGTTCGCTC TGGGTGGCCA TCGACCAGGA AGGGGGGCCG
GTGCAGAGGC TTGTCCCTCC TTTCACGCAG CTTCCTTCCG CGTGCGATCT CGCCCAACAG
GGGATAGAAG CCGTCGCGGA ATGGTCCTCG AAGGCGGCCA TGGACCTCCG CCGGATGGGC
ATTCACATCA ACCTGGCCCC CGTGTTGGAC TTGCGCGTCA ACGCCAATTC TCACTTCATG
GAAGGACGCT GCCTTGGCGA CGATCCCCTG ACCGTGGCGG AACTGGGCTG CCGATGGATC
AAGACTCTCC AGGGAGCGGG AGTCTCCGCC ACGGCGAAGC ACTTCCCGGG GCTTGGCCTG
GCGGAACTGG ACCCGCACCA CTTTGCCCCC GTCATCCGTT GGCCGGACCA GGAAGCCATG
CAAAGGGATC TGCTTCCCTT TCGGAAGGCA ATCGAGGCAG GGGTCCACTG CGTGATGACT
TCTCACGCCC TCTACCCTTT CATCGACTCC GTCTGGCCGG CCACCCTCTC ACCCGCGATA
AACAACGACC TGCTGCGCGG AACACTGGGG TTCCGAGGCA CACTCCTGAG CGACGACATG
GACATGGCCG CCGTTTCCGA AAAATATTCC TGGAAGGAGA TGGCCGAACA GGGGTTGCTC
GCCACGATCG ATTTCTTTCT GCTCTGTCAG AGAACCGAAA ACATCGAGCA GTTGCAGGGG
GCGCTCTGCG CAGCCATTGC CGGAAGCTCC CGGATCGAGG CCATGCACCG GGAATCCGCC
AAACGCATCG AGTGGCTCTA CGACCGGCAC CGGATGGAGC ATCAGGGAGG GTAG
 
Protein sequence
MVLKQVAEAG IHLLVGFRGT TFQEQLKSLI DEFGIGGIVL FRRNIQTPEQ LRSLLEEMQS 
HARQVLGRSL WVAIDQEGGP VQRLVPPFTQ LPSACDLAQQ GIEAVAEWSS KAAMDLRRMG
IHINLAPVLD LRVNANSHFM EGRCLGDDPL TVAELGCRWI KTLQGAGVSA TAKHFPGLGL
AELDPHHFAP VIRWPDQEAM QRDLLPFRKA IEAGVHCVMT SHALYPFIDS VWPATLSPAI
NNDLLRGTLG FRGTLLSDDM DMAAVSEKYS WKEMAEQGLL ATIDFFLLCQ RTENIEQLQG
ALCAAIAGSS RIEAMHRESA KRIEWLYDRH RMEHQGG