| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2520 |
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| Symbol | |
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| ID | 4459167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3104807 |
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| End bp | 3106027 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703284 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_846633 |
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| Protein GI | 116749946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCCG ACAAGATTTC CAAACTCAAA ATCAGCGAAG AACAAAAGTT CACGCCGGGG
AGCGGCCGCG GACGAAAGCT GCTGTGGCCG GCCTTCGTGG TCGTCTTGAT TGTCGCCGGG
CTCACGCTGG CCCATCGCTC CGGGTTTCTT TCCTCCTCGG TGGAAGTGCG CGCCACTTCC
GTCGGCTGGG TGTATCCCTC CCAAGTCATC ACCGAATTCA ATGCCAGCGG GTACGTCGTG
GCCCAGCGGA AGGCCGCGGT CGCTTCCAAG GGAACCGGGC GGCTGTCCAG CGTGGAAGTG
CAGGAAGGCA GCCGCGTGAA AGACGGGGAT GTGCTGGCAA GGATCGAAAA CGACGACCTG
GTGGCGGACT GCAACCAGGT CGCGGCACAA CTGGCAGCCG CTCGGTCGGA TCTCACCCGC
GCCGGGATCG AGCTCGACAC GGCGGCTCGC AACCATGTGC GGTTCTCCGA TCTCTACGGG
CGCAAGGCGG TTTCACAGGT GGATTTTGAA AACGCCCGGG ATCGGTACCT CAAAGCCAGG
GCCGCCGTCG ATTCGGCGAG ATCGAACATC CGCGTGCTTG AAGCCGCTCT GCGCAAGGCC
GAGGTCCTGG TTGAATACAC CGTCATCCGG GCCCCGTTCG ATGGCGTGGT GCTCACCAAG
GACGCGGATG TGGGCGAAGT GGTCGCTCCA TTCGGTTCCG CCACCAATGC CAAGGCGGCT
GTCGTCAACA TGGCGGACCT TTCTTCGCTC ATGGTGGAGG CCGACGTTTC CGAGTCCTTT
CTGTCCAGGG CTTCAATCGA ACAGCCGTGC GAGGTCCAGC TGGATTCACT CCCGGACACG
CGTTTCACGG GAAAGGTGGA CACGATCGTT CCCACCGCCG ACCGCACGAG GGGCACAGTC
ATGGTGAAAG TGCGCTTCGA CCGTCTCGAT CCGCGCATCC TTCCGGAGAT GAGCGCCAAG
GTATCCTTTC TGTCGAGACC GCTGCCGGAA GGTGAGAGCC GTCCTTTTCT GGGGGTTCAT
CGGGACGCGA GCACCCGGAG GGGCGATGCG GAGGGCGTTT TTCGCATCGA GGGCGACCGC
GCGGTCTGGG TGGCACTTCC GGGCGCGGAG ACCTTTGGGG ATTACGTGCT GCCCGGATCG
GCCATGAAAA ACGGCGAGCG TGTCGTGCTC AAGCCCCCTC AGGAATTGAA ATCCGGCGAC
AAGATAAAGG TTGCGGACTG A
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| Protein sequence | MDPDKISKLK ISEEQKFTPG SGRGRKLLWP AFVVVLIVAG LTLAHRSGFL SSSVEVRATS
VGWVYPSQVI TEFNASGYVV AQRKAAVASK GTGRLSSVEV QEGSRVKDGD VLARIENDDL
VADCNQVAAQ LAAARSDLTR AGIELDTAAR NHVRFSDLYG RKAVSQVDFE NARDRYLKAR
AAVDSARSNI RVLEAALRKA EVLVEYTVIR APFDGVVLTK DADVGEVVAP FGSATNAKAA
VVNMADLSSL MVEADVSESF LSRASIEQPC EVQLDSLPDT RFTGKVDTIV PTADRTRGTV
MVKVRFDRLD PRILPEMSAK VSFLSRPLPE GESRPFLGVH RDASTRRGDA EGVFRIEGDR
AVWVALPGAE TFGDYVLPGS AMKNGERVVL KPPQELKSGD KIKVAD
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