Gene Sfum_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2512 
Symbol 
ID4459192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3095887 
End bp3096519 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID639703276 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_846625 
Protein GI116749938 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTC AGACGGTGCA TCTGTTCGTT TTCGATACTC TGTCGGACTG GGAACCAGCC 
TTCGCCGTCG CGGGTATCAA CAACCCCGCA TTCCAGGCCA GGCCGCAACG CTATCGAGTC
CGGACGGTCG GTTTGACAAC GGATCGCGTG AGGACGATGG GAGGGGTGAC GGTCTTGCCC
GACATGGGGC TCGATGACCT GGAGCCGTCT CGGAGTGCCA TGCTCATCCT GCCGGGAGGC
ATGACCTGGG ACGAAGGCGG AAACACCGAG GCCGTCGAGA TGGCAAGAAA CTTTCTTGCG
ACGGGCGTTC CCGTGGCCGC CATCTGCGGT GCCACCGCAG GCCTGGCGCG CGCCGGCCTG
TTGGACGGAC TGCAGCATAC GAGCAATACC CCGGAGTACC TCAAGGCAAC GAACTATGAA
GGCGCGGCCT ACTACCTGGA CCAGGCGGCG GTCACCGACG GGGACCTGAT CACCGCGGGG
GGAGCCGCGC CCCTCGAGTT CGCCCGGGAA ATATTCAGGC GACTCGACGT GTACGAAACA
GCGACGCTCG ACGCCTGGTA CGGCTTGTTC AAAACCGGCG ATCCCGCGTA CTTTCACGCG
CTGGTCGAAG CCTCGACGGG CGGAGGAAGC TGA
 
Protein sequence
MEFQTVHLFV FDTLSDWEPA FAVAGINNPA FQARPQRYRV RTVGLTTDRV RTMGGVTVLP 
DMGLDDLEPS RSAMLILPGG MTWDEGGNTE AVEMARNFLA TGVPVAAICG ATAGLARAGL
LDGLQHTSNT PEYLKATNYE GAAYYLDQAA VTDGDLITAG GAAPLEFARE IFRRLDVYET
ATLDAWYGLF KTGDPAYFHA LVEASTGGGS