Gene Sfum_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2422 
Symbol 
ID4459274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2994033 
End bp2994512 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content57% 
IMG OID639703187 
Producthypothetical protein 
Protein accessionYP_846537 
Protein GI116749850 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0381334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTAA TCATCGACAC CCGTGAACAA ACGCCCTACG GCTTCGAGGG CTACGACGTG 
CAAACCGAGC GGGGCACCTT GCCGACCGGC GATTACTCCC TTGCGGGATT CGAGGATCGG
GTTGCAATCG AGCGAAAATC GCTGGACGAT CTGATCGGAT GCTTGAGCCA TGATCGTGAA
CGATTTGAGA AGGAGCTATG CCGGGCAAAG GCGCTCGACT TCTTCAGTGT GGTCATCGAA
GCCCCGCTTT CGAACATCCT GGCCAGTCGG TTTCGTTCGC GGATGACAGT CAACGCTGCG
GTGGAAACTA TCGCGGCGTT CTCAACAAGG TATCGCACGC CGTTCCTGTT CTGCGGCAAT
CGAGCGGGCG GGGAGCGCAT GACGTACAGC TTGTTGGCGA AGTACGGCCA CAACATCTTG
CGCGCCGCTC GGCTCTTCGA GAAAGGAAAT CGCCATGACA ACTTATCGTT TGCTGAATGA
 
Protein sequence
MRLIIDTREQ TPYGFEGYDV QTERGTLPTG DYSLAGFEDR VAIERKSLDD LIGCLSHDRE 
RFEKELCRAK ALDFFSVVIE APLSNILASR FRSRMTVNAA VETIAAFSTR YRTPFLFCGN
RAGGERMTYS LLAKYGHNIL RAARLFEKGN RHDNLSFAE