Gene Sfum_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2367 
Symbol 
ID4459353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2916403 
End bp2917038 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content64% 
IMG OID639703132 
Productphage integrase family protein 
Protein accessionYP_846483 
Protein GI116749796 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.683007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TCATTATCAC GGAACAGGAA CCGGGTATCG ATCCGGAGGC CGGGGCAGGC 
GTCAGGCACC TCGACGACGT TCAGCTCGAC CGGCTCATGG AGGCTTTCGC GATCTGGCAC
GATGCCGCGG CGAGCAGCTA TATCCGCAGG GTCCGCGGGC GTTACAGGCT GGCGTTTCTG
CTGCTGCGAT ACACCGGGGC GCGGCTGGGC GAGATCCTGA GGGTCGACGA CGCCTCCGAT
ATAGATTATG AGGGATGCGA AGTCAGGATC GCGGTGCGGA TGCCCGCCGC CATGAGACAG
GTGTTGCGCG CCGTTCCCCT GCCGCCCGAC GTCGTCGCCG CGGTGCTCGA TTACCTGAAC
GAATTCCCCG CGATGCAGGG CAGAGTTTTC GCGCTCGATC AGGGAAATTT CCGCCGGGAA
TTCTACCGCC GCGCCGAGGA GGCCCGGATA CCCCGGCCCC TCTCGCATCC TCACATCCTC
AGGCACACCA GGGCGATTGA AATGCTGCGG GCCGGGGTCC CGCTGACCGT GGTGCAGGAC
ATCCTGGGAC ACGTGCTGAG CAGCTCGACG ACCGTTTACC TGCAGCGCCC GGAAGTCATG
ATACGGCGCA TCCTCAAAGA CCGGGGATTG CTCTGA
 
Protein sequence
MAKIIITEQE PGIDPEAGAG VRHLDDVQLD RLMEAFAIWH DAAASSYIRR VRGRYRLAFL 
LLRYTGARLG EILRVDDASD IDYEGCEVRI AVRMPAAMRQ VLRAVPLPPD VVAAVLDYLN
EFPAMQGRVF ALDQGNFRRE FYRRAEEARI PRPLSHPHIL RHTRAIEMLR AGVPLTVVQD
ILGHVLSSST TVYLQRPEVM IRRILKDRGL L