Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2367 |
Symbol | |
ID | 4459353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2916403 |
End bp | 2917038 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639703132 |
Product | phage integrase family protein |
Protein accession | YP_846483 |
Protein GI | 116749796 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.683007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA TCATTATCAC GGAACAGGAA CCGGGTATCG ATCCGGAGGC CGGGGCAGGC GTCAGGCACC TCGACGACGT TCAGCTCGAC CGGCTCATGG AGGCTTTCGC GATCTGGCAC GATGCCGCGG CGAGCAGCTA TATCCGCAGG GTCCGCGGGC GTTACAGGCT GGCGTTTCTG CTGCTGCGAT ACACCGGGGC GCGGCTGGGC GAGATCCTGA GGGTCGACGA CGCCTCCGAT ATAGATTATG AGGGATGCGA AGTCAGGATC GCGGTGCGGA TGCCCGCCGC CATGAGACAG GTGTTGCGCG CCGTTCCCCT GCCGCCCGAC GTCGTCGCCG CGGTGCTCGA TTACCTGAAC GAATTCCCCG CGATGCAGGG CAGAGTTTTC GCGCTCGATC AGGGAAATTT CCGCCGGGAA TTCTACCGCC GCGCCGAGGA GGCCCGGATA CCCCGGCCCC TCTCGCATCC TCACATCCTC AGGCACACCA GGGCGATTGA AATGCTGCGG GCCGGGGTCC CGCTGACCGT GGTGCAGGAC ATCCTGGGAC ACGTGCTGAG CAGCTCGACG ACCGTTTACC TGCAGCGCCC GGAAGTCATG ATACGGCGCA TCCTCAAAGA CCGGGGATTG CTCTGA
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Protein sequence | MAKIIITEQE PGIDPEAGAG VRHLDDVQLD RLMEAFAIWH DAAASSYIRR VRGRYRLAFL LLRYTGARLG EILRVDDASD IDYEGCEVRI AVRMPAAMRQ VLRAVPLPPD VVAAVLDYLN EFPAMQGRVF ALDQGNFRRE FYRRAEEARI PRPLSHPHIL RHTRAIEMLR AGVPLTVVQD ILGHVLSSST TVYLQRPEVM IRRILKDRGL L
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