Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2333 |
Symbol | |
ID | 4459354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2866640 |
End bp | 2868010 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639703098 |
Product | MATE efflux family protein |
Protein accession | YP_846449 |
Protein GI | 116749762 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGGC AAACCGACGG CACGTCCAAG GGCCTTACGG GCATCATCTG GCGCAACAGC TGGCCGGTGC TGGGCCTCAT GCTGCTCAAT TTCGTGGTGG GCTACACGGA CATCTATGTG GCCGGCCTCC TGGGGCCGGA CGTGCAGGCC GCCGTGGGAT TCATCAGCCA GCAGTACTTC GTGCTCATCG TCCTCGCCAA CGCCCTGGCA ATCGGCACTG TGGCCGTCGT GTCCAAGGCG GCCGGGAGGA ACGACTGGGC CGGGGTACTC GACCTCACCC GGCAGTCGCT CATCCTGTGC GTGCTTTCCG GGCTGCTGCT CACGCTGCTC GGTTTCTCCG TGGGACCATA CGCCGTTCTG CGCCTCTTCA GCCTGCCCGA AACCGTGCAA CCCCTTGCGC TGGTCTATGT GAAGATATAC GCTGCCGCCC TCTTCCCCAA CTATGTCATC ATCGTCGCGG GAGCCGTCTT TCGCGCCGTG GGCAAGCCCG TGATCGCCTT TCGCATCATG TTCGTCGTGG CCGCTCTCAA CATCCTGGCG AATTTCGGGC TGGTCTTCGG CCTCGGCCCT CTGCCCAGGC TCGGCTACGC GGGAATCGCC GTCGCCACGG CGGTGTCCAT GTCCGCCGGA GCCTGTGGAA TCCTGGCGGT CCTGTTGAGG CATGAATGGA AACCGATGTG GAGCGATACA TGGCGGCTGT CGCGAGAGGT GCTCCGGGAG CTGGGCCGCA TCGGCTGGCC CGCCGTGGTG GTCCAGATTG CATGGAACGC CGCGAGCCTC GTCATCTACC AGTTCCTGGG TTATCTCGGG GATTGGAGCG TGCCCGCCAT GGCCGCATAC GCCAACGGAC TGCGGATCGA ATCGCTCACC TTTCTGCCAG CATTCGCGCT GAACATGGCC GCGGCGGTGC TGGTCGGCCA GAGCCTCGGG GCACACTCGG TGGAACAGGC GCGACGATTC GGATGGAGGA TCGCCGGCAT GGGCGTGCTT TCCCTTTCGG CGATCGCCGC GGTCCTGTAT GCCGCCGCCC CCTGGATCGC CCATCGCCTG ACCTCGAATC CCGACGTCCT GTTCGAAACG ATCCGCTACT TGAGGATCAA CCTGGTCGTG GCGCCGGCGA TGGTTCTCGG AATCGTGCTC GGGGGAGGCA TGCAGGGAGC GGGGTATACG CGGGGCGTCA TGGCGGTGGT GGTGATCGCC ACATGGCTGA TTCGCATCCC GCTGGCCGCC TTCCTGAGTT TCACCCTGGA CCTGGGAGCG CTCGGCATAT GGCTGGCCAT GTCGACCTCG ATCGTCGTCC AGGCGGTCAT GATGACGTGG ACGTTTCACA GGGGATACTG GCACAAGACG ATTTCATCTT CCGATGCGTG A
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Protein sequence | MERQTDGTSK GLTGIIWRNS WPVLGLMLLN FVVGYTDIYV AGLLGPDVQA AVGFISQQYF VLIVLANALA IGTVAVVSKA AGRNDWAGVL DLTRQSLILC VLSGLLLTLL GFSVGPYAVL RLFSLPETVQ PLALVYVKIY AAALFPNYVI IVAGAVFRAV GKPVIAFRIM FVVAALNILA NFGLVFGLGP LPRLGYAGIA VATAVSMSAG ACGILAVLLR HEWKPMWSDT WRLSREVLRE LGRIGWPAVV VQIAWNAASL VIYQFLGYLG DWSVPAMAAY ANGLRIESLT FLPAFALNMA AAVLVGQSLG AHSVEQARRF GWRIAGMGVL SLSAIAAVLY AAAPWIAHRL TSNPDVLFET IRYLRINLVV APAMVLGIVL GGGMQGAGYT RGVMAVVVIA TWLIRIPLAA FLSFTLDLGA LGIWLAMSTS IVVQAVMMTW TFHRGYWHKT ISSSDA
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