| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2220 |
|---|
| Symbol | |
|---|
| ID | 4459486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2722601 |
|---|
| End bp | 2723113 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702986 |
|---|
| Product | hydrogenase maturation protease |
|---|
| Protein accession | YP_846337 |
|---|
| Protein GI | 116749650 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00130] coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit). |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.861671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.717829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGTC AGATCCGGGG TGCGGAGGTC ATGGTCATCG GTTGCGGTAA CGTCCTGTTT
GGCGACGACG GCTTTGGCCC CGCGGTGATT GAGCGACTGC AGACCGGGTA CCGGTTGCCC
GACGGGATGG TAGCCGTCGA CGCGGGAACC GCCGCGGGTG AGCTGCTGCT GGACGCGCTT
CTTGGTGACG AAGCGCCCCG GACCCTGATC ATTGTCGATG CGATGGATCT CGGCCTCAGT
CCTGGAACGG TTGAAGAGAT TCCCCTGGAA GCCATCCCTG AGAACAAACG GGCGGACTTC
AGCGTGCACC AGTTTCCCGC TGTCGACTTC CTGAGAGAGC TCAAGGAACG CAAGGGCATT
TCCTTGCGGC TTCTGGGGTG CCAGGTGGAA TCGGTGCCCG GGGAGATTTG CCCGGGCCTG
TCCGTCTGCG TTGCCCGATC CGTTGGGGAA ACGGCGGAAG ATATCTACCA AATGGTCTGC
AAGGAGGTCG GAATCCAACA CTCGACGATC TGA
|
|---|
| Protein sequence | MYRQIRGAEV MVIGCGNVLF GDDGFGPAVI ERLQTGYRLP DGMVAVDAGT AAGELLLDAL
LGDEAPRTLI IVDAMDLGLS PGTVEEIPLE AIPENKRADF SVHQFPAVDF LRELKERKGI
SLRLLGCQVE SVPGEICPGL SVCVARSVGE TAEDIYQMVC KEVGIQHSTI
|
|---|
| |