Gene Sfum_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2124 
Symbol 
ID4459548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2598886 
End bp2599623 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content61% 
IMG OID639702891 
Producthypothetical protein 
Protein accessionYP_846242 
Protein GI116749555 
COG category[S] Function unknown 
COG ID[COG2122] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000764325 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCTATA ACGAAACCCG TCGCTTTTAC AGGCTTCAGC ATCAGGACCG GAAGGGATGG 
GTCGGTTTTC AGGTCCGTTA CCGGGAGACC GACCTCTGGG TCCGGGCGCA ACGAAACCTC
GAACGGGAAA CCTTCACGGC GATCCTCAAT TGTCGCCGCC AGTTGGAACG ATACATCGCG
GAACACCCCC CATTTCTGAA ATCACTCACG CCACTCCCCG AAGATCCGCT GGCGCCGCCC
CTTGTCAAGG TCATGCTGTT TGCCGCCCGG AGTGCCGGCG TAGGTCCCAT GGCGAGCGTC
GCGGGAGCCG TCGCACAGGA AGTCGCCCTG TCGCTCAAGC CCTTTTCGCC TTCCGTGATC
GTCGAAAACG GCGGCGACTG TTACCTGGAC ATTCGAGAAG AAACCACCAT CGGCATTTAT
GCGGGTCCTC ATTCTCCCTT CAGCGGCAAC ATCGGCCTGC GGTTCGAAGG GAGCCGTTTC
CCCCTCGGAA TCTGCACCTC ATCGGGAACG GTCGGGCCAT CGCTCAGCTT CGGCAGAGCC
GACGCCGTCA CCGTGGCTGC AAAGGACGCG GCCCTGGCCG ACGCCGCCGC AACCGCCGTC
GGCAACCTGG TGAAAACCCC GTCGCATATC GAGGAGGCCT TGGAAAGAGC ACGGACGATC
CCTTCTCTTG AAGGCGTTCT GATCGTCATC AAGGACAAGC TCGGGATCTG GGGCAACCTT
GAAGTAGCCC GCCTTTAG
 
Protein sequence
MPYNETRRFY RLQHQDRKGW VGFQVRYRET DLWVRAQRNL ERETFTAILN CRRQLERYIA 
EHPPFLKSLT PLPEDPLAPP LVKVMLFAAR SAGVGPMASV AGAVAQEVAL SLKPFSPSVI
VENGGDCYLD IREETTIGIY AGPHSPFSGN IGLRFEGSRF PLGICTSSGT VGPSLSFGRA
DAVTVAAKDA ALADAAATAV GNLVKTPSHI EEALERARTI PSLEGVLIVI KDKLGIWGNL
EVARL