| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2123 |
|---|
| Symbol | guaA |
|---|
| ID | 4459547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2597171 |
|---|
| End bp | 2598727 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639702890 |
|---|
| Product | GMP synthase |
|---|
| Protein accession | YP_846241 |
|---|
| Protein GI | 116749554 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.69459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00100541 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACG ATTATCTTCA CGAAGAACGG GTTCTGATAC TCGATTTTGG GTCCCAGTAC
ACTCAGCTCA TCGCCAGGCG TGTGCGGGAA AGCCATGTCT ACTGCGAAAT TCATCCTTTC
AACATGGACA TGGAGTCGAT CAAGGCTTTC AGGCCCAAGG GAATCATTCT GTCCGGCGGT
CCTTCCAGCG TACACGAACA GGGCGCCCCT TTTTCGGATC CGGCGATCTT CGAGTTGGGG
GTTCCCGTTC TCGGAATCTG CTACGGCATG CAGTTGATGG CCCGGCAACT CGGTGGTTCC
GTGGAAAGAG CGGACCGCAG GGAATACGGT CCGGCGACCA TCGACATCGA TGTGCCGGAT
GAGCTCTTTC GCGACATCGA GCGCGAAGGC GTGCGCGTGT GGATGAGCCA TGGCGACCGT
ATCCTCGAGC TGCCCGCCGG TTTCTCCATT CTGGCCCGCA GCGACAATTC TCCCGCCGCC
GCCATGGGAA ATTCCGAACG GCGCCTCTAC GGCGTGCAGT TCCACCCCGA AGTCGTTCAC
ACGCCTTGCG GCAAGGACAT CCTGGACAAC TTCCTGTTTC GCACCTGCCG CTGCCGGGCC
ACGTGGACGA TGAAATCGTT CGTGGAATCC GCGGTGGCCT CCATCCGCGA GCAGGTTGGC
GACGACCAGG TAATCTGCGC GCTGAGCGGA GGGGTGGATT CTTCCGTGGT CGCGGTGCTC
CTGCACAATG CCATAGGTTC CAGGCTTCAC TGCATTTTCG TCAACAACGG GCTTCTTCGA
AAAGGCGAGG CGGAAAGCGT CCAGCGGGTC TTTCGCGATC ACTTCTCCAT CAACCTCATT
TATGCGGACG CCTCCGATCT TTTCCTGGAA CGGCTCAAGG ACGTCACCGA CCCCGAACGG
AAGCGCAAGA TCATCGGCAA TCTGTTTGTC GAGTTGTTCG AGAGGGAAGC CGGCCGCCTG
GAAAGCGTGA AATACCTGGC CCAGGGGACC CTTTACCCGG ATGTGATCGA GAGCGTGTCG
TTCAAAGGCC CTTCGGCGAC CATCAAGACC CATCACAACG TGGGCGGATT GCCCGAACGG
ATGAACCTGA AGCTGATTGA GCCCCTGCGG GAGCTGTTCA AGGACGAAGT CCGCATGCTC
GGGCGGGAGT TGGGGCTGCC GGAACGGATC ATCATGCGCC ACCCCTTTCC CGGCCCGGGC
CTGGCGATTC GAACCATCGG AGCAGTGACG CCGGAGAGTC TCGAGATTCT TCGCGACGCG
GACCGGATCA TCCTGGAAGA AATCGAAGCC TCCGGGTGGT ACGACCACGT ATGGCAGGCT
TTCGCGGTGC TTCTGCCGAT CCGGTCGGTG GGAGTCATGG GGGACGAACG CACCTACGAC
CAGGTCGTGG CGGTGCGCGC GGTGGAAAGC GTGGACGCCA TGACCGCGGA CTGGGCGAGA
CTGCCCTACG AAGTGCTTCA AAGGATTTCC AATCGCATCA TCAACGAGGT CAAAGGCGTG
AACCGGGTGG TCTACGACAT TTCTTCCAAA CCTCCCGGCA CCATCGAATG GGAATGA
|
|---|
| Protein sequence | MTYDYLHEER VLILDFGSQY TQLIARRVRE SHVYCEIHPF NMDMESIKAF RPKGIILSGG
PSSVHEQGAP FSDPAIFELG VPVLGICYGM QLMARQLGGS VERADRREYG PATIDIDVPD
ELFRDIEREG VRVWMSHGDR ILELPAGFSI LARSDNSPAA AMGNSERRLY GVQFHPEVVH
TPCGKDILDN FLFRTCRCRA TWTMKSFVES AVASIREQVG DDQVICALSG GVDSSVVAVL
LHNAIGSRLH CIFVNNGLLR KGEAESVQRV FRDHFSINLI YADASDLFLE RLKDVTDPER
KRKIIGNLFV ELFEREAGRL ESVKYLAQGT LYPDVIESVS FKGPSATIKT HHNVGGLPER
MNLKLIEPLR ELFKDEVRML GRELGLPERI IMRHPFPGPG LAIRTIGAVT PESLEILRDA
DRIILEEIEA SGWYDHVWQA FAVLLPIRSV GVMGDERTYD QVVAVRAVES VDAMTADWAR
LPYEVLQRIS NRIINEVKGV NRVVYDISSK PPGTIEWE
|
|---|
| |