Gene Sfum_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2121 
Symbol 
ID4459580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2594416 
End bp2595432 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID639702888 
ProductPpx/GppA phosphatase 
Protein accessionYP_846239 
Protein GI116749552 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.577913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000855252 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGACCG GCGATTGTTT CGCTTCCATC GACCTCGGTT CGCATACGGT CCGGCTCCTG 
ATCGCCCGGA GGGATGATCT GGAGATCGTT CCGCTGCGCG TGGAGCGCAG AATCACGCGG
CTGGCGGAGG ACTTCGGCAC GGAAGACCGC CTCGGGGAGA AAGGAATGCA CGCGACCCTG
GCCGCCATGG AGGAATACGT GCGGCTCATG GGTCGGTACG AGGTCCAATT CGTTTCCTGC
GGGGCTACCG GAGTGGTGCG CAGGGCGAGA AATCAGGACG ATTTTCTCGA CCAGGTGCGG
CGCCGGACGG GCATATCTCC CGCCGTGCTC TCGGAGGATT CCGAGGCGCT TCTTTCCGCC
AAGGGGACCC TGAGCGCCCT GCCTTCGCGC GCGGGTCTGA CCCTGCTGTT CGACCTTGGC
GGCAGCAGCA CGGAGTTTCT TCTCCTGGAT TCCGTTCACC CCGACGCCCC TCTTTTCGTA
ACGAGCGTGT TCGTTGGAGC AGCGACGCTC ACCGAGCGTT TCCTCGCCGG CGACCCGCCT
TCCGCTTCGT CCCTTGCGGC CGCGGCGGCA GCCGCGGCCG GGAGCATCGC CCCGGTGATA
TCGGCCGTCG CGCCTCACCT GGCGGCAATA AGGCCCGATC GGCCTTTTCT GCTGGCCGGA
ACGGCGGGCA CAGTCACCAC CCTCGCCGCT ATGTATCTGC GCATGGAGCC CTACGAACCG
TTCAGGGTAA ACGGGCTCGC TTTATCCTAT GCCTGGATCT CGGAGACGAT CGCCTCGCTC
GCCTCTTCCA CGCTCGCGCA ACGCGGCGGA ATCCGCGGGC TTGAAAAGGG CCGCGAGGAC
ATTATCCTGG GAGGAGCCGT CATCGTCGGC GAAATCGTCC GGGGATTCAA CGTCGACACG
CTCACGGCGG CCGACGCGGG TCTCCTGGAA GGCCTCCTGC TCGACCTGGT TGAAAAGAGC
TGCGGGATCC GTTCGACCCT GGTCAGCCCC TTGACATGGC GACCGCAAAA AGAGTAA
 
Protein sequence
MSTGDCFASI DLGSHTVRLL IARRDDLEIV PLRVERRITR LAEDFGTEDR LGEKGMHATL 
AAMEEYVRLM GRYEVQFVSC GATGVVRRAR NQDDFLDQVR RRTGISPAVL SEDSEALLSA
KGTLSALPSR AGLTLLFDLG GSSTEFLLLD SVHPDAPLFV TSVFVGAATL TERFLAGDPP
SASSLAAAAA AAAGSIAPVI SAVAPHLAAI RPDRPFLLAG TAGTVTTLAA MYLRMEPYEP
FRVNGLALSY AWISETIASL ASSTLAQRGG IRGLEKGRED IILGGAVIVG EIVRGFNVDT
LTAADAGLLE GLLLDLVEKS CGIRSTLVSP LTWRPQKE