Gene Sfum_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2070 
Symbol 
ID4459650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2532426 
End bp2533163 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID639702837 
ProductABC transporter related 
Protein accessionYP_846188 
Protein GI116749501 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0552622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCGG AGGAGAAAAC CCTGGTTGTC GAGGATCTCG TGAAGACGTA CCAGGGCCGT 
TGCGTGGTCG ACCGCGTGAA CCTGACGGTT CGGGAAGGCC AGATCGTGGG ACTGCTCGGG
CCGAACGGCG CCGGCAAGTC CACCACGTTC TACAGCGTGG TGGGGATCAT TCGGCCCGAT
CGGGGGGCGG TGATCCTGAA CGGGGAGAAC ATCATCGGTC TTCCAATGTA TCTTCGCGCG
AGAAAGGGGA TCACCTATCT GCCCCAGGAG CCTTCGGTCT TTCGCAAATT GACCGTGGAA
GAGAACATCA TGGCGATCCT GGAGACCTTG AACATCGGCC GTGACGAACG CAAGGTGCGG
CTGCGGGAAC TGCTCGGCGA GCTCAAGCTT GCGCACCTCG CCAAGAACAA GGCGGATCGC
CTTTCGGGAG GAGAACGACG GCGGGTGGAG ATCACGAGAG CCCTGGTGAC TCAGCCCGGG
TTCATCCTGC TGGATGAGCC GTTTGCGGGC ATCGATCCCA TCGCGGTCCT CGAGATACAG
GGGCTCATAC GGTCGCTCAA AGCGAAAGGG ATCGGGGTCC TGATATCCGA TCACAACGTA
CGGGAAACGC TCAAGGTGTG CGACAGAGCA TATATTTTGC ATGAAGGCAG GATTCTCGAG
GAAGGTGATC CGCTGAGTAT CGCCCAAAGC GATCTGGCTC GCCGGACCTA CCTCGGGGAT
CATTTCAGCT TGTCATGA
 
Protein sequence
MSSEEKTLVV EDLVKTYQGR CVVDRVNLTV REGQIVGLLG PNGAGKSTTF YSVVGIIRPD 
RGAVILNGEN IIGLPMYLRA RKGITYLPQE PSVFRKLTVE ENIMAILETL NIGRDERKVR
LRELLGELKL AHLAKNKADR LSGGERRRVE ITRALVTQPG FILLDEPFAG IDPIAVLEIQ
GLIRSLKAKG IGVLISDHNV RETLKVCDRA YILHEGRILE EGDPLSIAQS DLARRTYLGD
HFSLS