Gene Sfum_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2060 
Symbol 
ID4459640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2518889 
End bp2520082 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content63% 
IMG OID639702827 
Productphosphoglycerate kinase 
Protein accessionYP_846178 
Protein GI116749491 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TTGGCGAGTT GGAATTGAGC GGCAAGCGCG TGTTCATCCG AGTCGACTTC 
AACGTGCCGC TGGACAAGGA GTTTCGCGTC AAGGACGATT TGCGCATTCG TGCCGTTCTG
CCGACGCTGA ACAAGGTGAT CGAAAAGGGG GGCAAGGCGA TCCTCGCGTC CCACCTCGGC
CGGCCCAAGG GCAAGCCGTC GGCCGAATTT TCGCTCAAGC CGGTTGGAGA GCACCTCTCC
CGGCTGATCG ACCGGCCGGT GCCGCTGGCG CCCGACTGCA CGGGCAGGGA GGTTGTCGAG
CGGATTGCGC AAATGAAGAA CGGCGACGTG CTTCTCCTGG AGAACCTGCG TTTTCACGCC
GAAGAGGAAA AGAACGACGA AGCGTTTTCG CGGGCACTCG CGGATTTGGC GGATGTCTAC
GTGAACGACG CCTTTGCCGT GTCTCACCGG GCGCACGCTT CGGTGCACGG CATGACGCGC
TTCGCGCGGG AATGCGCGGC GGGGTACCAG CTCGAAAACG AGATCAAGTA TTTCCGGAAG
GCCATGGACA ATCCGGCGCG CCCGATGGCC ATGGTGATCG GGGGCGCCAA GGTCTCCACC
AAAATCGGCG TTCTCGAACA CCTGATATCG AGGGTCGATT TCCTGGTCAT CGGCGGGGCC
ATGGCGAACA CGTTCTTCAA GGCCCAGGGC AAGGAGGTCG GCAGGTCGCT GGTGGAGGAC
GATCACCTGG AAACCGCGGC CCGGCTGCTC AAGGCCGCCG CTGAAAAGGG CGTCAAGGTG
TATCTGCCGG TGGATGCGGT GGTGGCGCCG AGCCTCGAGA GCTGCGGAGA CGTGCAGCAG
GTCCCGGTGG AAAAGGTCCC GAAGGACAGG CTCATCCTCG ATGTGGGCTC GAAGTCCATC
GAGGTTTTCG AATCGGTTCT GAAGAACTGT CGCACCATCG TGTGGAACGG CCCGCTGGGG
GCGTTCGAAA CCCCGCCGTT CAACAAGGGC ACGTTCGCCC TGGCCGAATT CCTGGGCAGC
CTCGACGCGC TGACCGTGAT CGGCGGCGGA GATTCCGCGG CCGCCGTGAA GCAGGCCAAC
ATGGAAGACA AGGTGAGCTA CGTGTCGACG GGAGGGGGCG CGTTCCTGGA AATGCTGGAG
GGCATAACCC TGCCCGGAGT GGCCGCCCTG GAGGAGTGTT GCGGGAGGTC TTAG
 
Protein sequence
MKTVGELELS GKRVFIRVDF NVPLDKEFRV KDDLRIRAVL PTLNKVIEKG GKAILASHLG 
RPKGKPSAEF SLKPVGEHLS RLIDRPVPLA PDCTGREVVE RIAQMKNGDV LLLENLRFHA
EEEKNDEAFS RALADLADVY VNDAFAVSHR AHASVHGMTR FARECAAGYQ LENEIKYFRK
AMDNPARPMA MVIGGAKVST KIGVLEHLIS RVDFLVIGGA MANTFFKAQG KEVGRSLVED
DHLETAARLL KAAAEKGVKV YLPVDAVVAP SLESCGDVQQ VPVEKVPKDR LILDVGSKSI
EVFESVLKNC RTIVWNGPLG AFETPPFNKG TFALAEFLGS LDALTVIGGG DSAAAVKQAN
MEDKVSYVST GGGAFLEMLE GITLPGVAAL EECCGRS