Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2054 |
Symbol | |
ID | 4459633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2512538 |
End bp | 2513470 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639702820 |
Product | hypothetical protein |
Protein accession | YP_846172 |
Protein GI | 116749485 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.627069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCAAA ACCGGCTTCG AAATGTTGGG GCGTCCGTCC GTCAGCGTCT CCTCAACCTT TCAAAGAAAA AGTCCGAACC CTTTGATCTC GTGCTGACAC GCTACGCCCT GGAAAGACTA TTGTACAGAA TAGGGCGCTC TGAATGGCGA AGCAGATTTC TGCTCAAGGG TGCCATGCTG TACACCCTCT GGTTCGATGC GTCCTACCGC CCGACCAGGG ACATGGTTCT TCTTGGCTTC GGTCCAGGCC AAATCGCTCA CCTGGAAGGG ACTTTTCGTG CCTTGTGCGA AGTCGCCGTC GAGGACGACG GGCTAACTTT TCTGAAGGAG AACGTTCGCG GTTCAGAGAT CCGAGGTGAG AGCGAGTACC GGGGAGTACG GATGCAAGTG ACCGCGATCC TTTCAGGTGC CGTCATCCCC CTCCAAATTG ACGTAGCTTT TGGTGACGTG GTTCTTCCTG GTCCGGAGGA AGTTCGCTAT CCAACGATTC TGGACCTTCC GGCGCCTGAA GTCCTCGCCT ACCCAAGGTA CACCGTTGTC TCCGAGAAAT TTCAGGCCAT GGTGATGCTC GGCATTGCCA ATAGTCGCAT GAAGGATTTC TATGATATTC GGGAACTGGC ACGGCGGTTC GAATTCGATG GCTTGCTGCT CAGCCGGGCG ATACGGGCTA CGTTCGAACA GCGCAGGACC GTTCTGCCGG CGGAGATCCC GCTGGCTTTG ACGGAATCTT TCTCCCATGA CAGGGTCAAG ATGACCCAAT GGGGCGCATT CATCCGTAAG AATCGTCTCA TGGAGGAGAA GGTATCCTTG CAGGAGGTGG CGGTTTTTCT GACGGGTTTT CTAATGCCTC CCGTTCGTGC CGCCCAACAG GGAGAAGCAT TCGAGATGAT TTGGACCGCT CCGGGCCCTT GGGAACCGCG CAATCCGACC TGA
|
Protein sequence | MTQNRLRNVG ASVRQRLLNL SKKKSEPFDL VLTRYALERL LYRIGRSEWR SRFLLKGAML YTLWFDASYR PTRDMVLLGF GPGQIAHLEG TFRALCEVAV EDDGLTFLKE NVRGSEIRGE SEYRGVRMQV TAILSGAVIP LQIDVAFGDV VLPGPEEVRY PTILDLPAPE VLAYPRYTVV SEKFQAMVML GIANSRMKDF YDIRELARRF EFDGLLLSRA IRATFEQRRT VLPAEIPLAL TESFSHDRVK MTQWGAFIRK NRLMEEKVSL QEVAVFLTGF LMPPVRAAQQ GEAFEMIWTA PGPWEPRNPT
|
| |