| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2018 |
|---|
| Symbol | |
|---|
| ID | 4459684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2469819 |
|---|
| End bp | 2470709 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702784 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_846136 |
|---|
| Protein GI | 116749449 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.671981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC GAAAATTCGG ATGTATCACC GTAATTCCCG GGCGACAGGA GTCGCGCTAC
CCGTATTGCA CTTCGCTGTT CATCGATGAC GAACGCAAGG CCGTCATCGA CCCGGGCTCC
GACGAGGAGC TGCTCAGGGA CATCGCCTCC CGCAACAGGA TCGACGCCCT GATCTGCACT
CACTACCACG AGGACCACAC CGCCTTCAAT CGTCTTTTCG ATGACGTGCC GCTGTGGGTC
CACGAGGCGG AGGAGATGTG TTACAGGTTC TACTCCACCC TTCTGCACTG CTACGGCGTC
GATGACGGGC CCTTCACCGG GGAATGGCGC GATTTTCTGG TCGGGGAGTT CCATTACCGG
GAACGTTCCC CCGCCCGGAC CTTCAGGGAC GGCGACATCC TGGACTTCGG CCGGACGAAG
GCCCGGGTGG TTCACACACC GGGCCACACC TTCGGGCACT GCGCGCTGCA CTTTCCGGAC
GAGGGAGTCC TTTTCCTCGC AGACCTTGAC CTGACTCCTT TCGGCCCCTG GTACGGCGAC
CGGGTATCGG ATATCGACGC GACGATCGCA TCGGTGGAGC GGCTGCTGAA GATCCCGGCG
GACGTTTACA TCACCTCTCA CGAGGCCGGC ATCATCGAAG GGGACATTAC GGGGCTTGCC
GAGCGGTACC TTGCGGTGAT CGACCAGCGG GAAAAGAAAC TGCTGGAATT TCTTGAAGAA
GAGCCGAGAA CCCTGGACGA GATCGTCAAT CGCCGGATCA TCTACGGGAA GGAGCGCCTT
CCGCTCTTCT TTTTTGACAT GGGCGAGCGC GGCATGATGG CAAAGCACCT GGTTCGCCTG
ATCCGGGAGG GCAGCGTGCG TGAGCGGGAC GGCCGCTTCT CCCTGCGCTG A
|
|---|
| Protein sequence | MELRKFGCIT VIPGRQESRY PYCTSLFIDD ERKAVIDPGS DEELLRDIAS RNRIDALICT
HYHEDHTAFN RLFDDVPLWV HEAEEMCYRF YSTLLHCYGV DDGPFTGEWR DFLVGEFHYR
ERSPARTFRD GDILDFGRTK ARVVHTPGHT FGHCALHFPD EGVLFLADLD LTPFGPWYGD
RVSDIDATIA SVERLLKIPA DVYITSHEAG IIEGDITGLA ERYLAVIDQR EKKLLEFLEE
EPRTLDEIVN RRIIYGKERL PLFFFDMGER GMMAKHLVRL IREGSVRERD GRFSLR
|
|---|
| |