| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1889 |
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| Symbol | |
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| ID | 4459795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2303861 |
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| End bp | 2306881 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702656 |
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| Product | hypothetical protein |
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| Protein accession | YP_846009 |
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| Protein GI | 116749322 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5281] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.405118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.121372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAA ACAGGATCCA GATTGTGATC GTTGCCGATT CCAGTAAGGC CGTGAAGAAC
ATACGCATGG TCTCCGACGA ATTCGATCGG TTCAAATCCT CCGCCTGCAA CTCCATTGCG
GGCACAAATA GCGCGATTTC GTCGATGGGC GCCGGCCTCG CCTCGGCCAT CAGCCTTTTG
CAGGGCTTCG CTGCCGCTAT GGCGGCGGCG AAAGCCGCTG AGATCGGTCT TGGCTTCAAC
AAAGAGGTCG AGGATGCGCG CCTCGGCATA GCGACCCTCC TGGCGGCACA AGGCCAATTT
GTCGATCAAC AGGGCCAACA ATTGCAGGGG CAGCAAAGGA TAAACGCGGC CATGGCCTAT
TCGGCCGATC TCACCAGGCA GCTCCAGGTC GACAACCTCA AGACGACGGC CACGTTTCAG
CAATTGCTCA AGGCGTTTCA GCAGACGCTC TCGCCGGGTT TGTCCGAGGG ACTCTCCGTC
GACCAGGTGC GACAATACAC CCTGGCGATG GTGCAGGCCG CCTCCGCCAT GCAAATCCCT
CTCGACATGA TGGCGGAAGA GACCCGGTCC CTGCTCAAGG GGACGATCAC TCCGCGCAAT
ACTCTTATCG CGACCGCCCT CGGCATCACA CCGGAGGATA TTCGAAAACT CCAGGGGGAC
GCGGAAGGCC TGTTTACCTT CATCATGGGC AAGCTGCAGG CGTTCCAGGA TTTCGGCCAG
GTCACCCAGA CGACTTATTC GGGGCTCCTC AGCAATGCCC AGGATGCCCT GGCAAACGTT
CTGGGCAAAG CCACCGAACC ATTTTTCGAG AGCCTCAAAG CGAGCCTCAA GCGATTCACC
GACTATGCGC TCCAGGTCGA TGCGGTCACC GGGAATTTGA AACTCAACCC GGAACTGGTG
AACGCCTTCG AGCTCCTGAA CGACACTCTG CGCATGGCCA TTGCCCTTGC GGAAAGCCTT
GCAAAAACGC TCGGGGCCGT GGGCATCGCA TACAAGGCGA TGAAGGAAGC TCAAAAGGCG
GCCGCCCTTC AGAATACTCC AGCCGGATTT GCCGGTCCGG AGCTGGCTGA TTTTACCGAC
GTGCAGCGCT TGGAGCGCGT GAAGCAGCTC ATGGCGAAAA TCGTCGAAGA CCAGCAAACC
ATAGCCAACT GGAAAGCCGG AGGCATTGGC GGGTCGATAT TGGGCGCCCC TCAAATCGGC
CTGGCGAATC TTGATATCTC GAATTCGGTC ACCTCCCTTG AGAACTTCCG CGCTCAAATG
GTTGCGGCCG CCCAGAACAC CGAGGAGCTC GACGCCTTCC TCAAAAGCCT CAAGCAGTCT
TCCGACGCGG TTGCCGCGGC ACAGGAAACG GCAGCCGGGA ACATCGGCAG CGTGAGATAT
GAGGCGGCCA GAGCCGCAAT GGACCTGGAC TCGTTCAAGA AGAAGCTCGA AGAAGTCGCC
CGCATAAATC TCACCGGCCT GAGCGACGAT CTCAGCAAGT CCATTGAGGG ATTGAAGGCT
AAGATCGCGG TCGCTCTTCA AGGCGGGGAC CCCAGGCAGC AGGCGATCGC CGCCGCGTAT
ACGGAGAGAA TTCGAAAACA GGCGACAGCC TGGGAACTGG CTCTCAAGGA AAATGCCGCA
CCGGAGGTTT TTTCCGCCAT ATCGGCACAA AAACAACAGG CCGAAGAAGA GGCGTATTGG
GGCAGATATC TGGCCGGCGC CGAAGCCGTC CGCAAAACCA CGGCCCGTGG CGCCGCCTCC
GGCGCATCCC CCATCGACAT CGACAAGATC GACAAGGACG TGCTTCAGTT CAGGGAGCGC
ATGCAAAAGC TCTACTCCGA GCTCGAAGAC CTCGACTCCG AGTACCGCAT CGCACAGCTC
GAACAATCCG GCCGCAACTA CGACGCCGAA GCCGAGCGGA TCGACCGCCA GGCCGCAAAG
CGCAAGGAAG CCTTCGCCAA GGAGGTGGCC GATGCAGAGC AGGCCTATCT CGAAATGGAG
CAAAAACTCT CCGGCAGCCG GGGCGGAACT GCCGAGGCGT GGGCGCAGCT TGCGGATCTC
AAGACGAAAT ACGACGCCTT GAAGAAAGCC GCCCAGGAAT ACGGCGACAA GGTCGACCGC
AATCTGCAAC TCACCAAGGA CATGAAGAAG GCCGAAGACG ACGCGAAACG CGCGGAGGAT
CTCGCCCAAC TGAACCTCGA ATACGGCAAG CTGACCGGAA CCCTCCAGGA GCAGCTCGCC
CTCCAGATTC TCCTGCTCCG GGCCGAAAAG GACCGGAAGA TCCTCGCGGC CGACCCGGAG
CTCCGGGCGG CCTACGAGCG CCTCTATGCC GAGCAGGAAC GGCTGCTCCG CCTCCAGCGC
GACGGCTCCT TTATGGACGG CCTGTCCGAA GGACTCAAGA AATGGCAGCG CGAAATGCCG
ACGGCGTTCG GCCAGGGCCT TGAGGCAATC GAAATGCTGA AGCGCGGCAT CGATTCCGCG
GCCGACGCCC TGGCCGAATT CACCATGACC GGCAAGATGG ACTTTTCGAG CTTTGCCGAC
TCGATCATCA GGGACATCCT CCGCATGCAG TACAAGGCAC TGCTCACGCA AATGTTCGGC
GGTGAAGGCG GTCTCTTCGA TTGGCTAAAG GGACTCTTTG GCGGCGGCGG TCCGACCACC
GGCGCCTACG GGGTCGAGAC CTACGCCGGG ATCGGGCACC GGGGAGGACC GGCCGAAAGC
CTGCCGGACC ACCGATACGT GGCCTCGTAT CTGTTCGCCC GCGCCCCGCG CCTCCACGAC
GGGCTCGCCC CGGATGAGTT CCCGGCCGTC CTGCAGCGGG GCGAGCGGGT GCTCTCGCGC
CGGGAAACCC GCGAATACGG CGCCGCAAAC CGCGCCCCGG AGGTCGTCGT CAACGTCCAA
AACAAGACGA ACACGCCGGT CACGGCCGAT AAGACCCGCG CGGCCTTCGA CGGCAAACGC
TACGTGGTCG ACGTGATCCT CGACGACTAC AGCCGCGGGG GAGACATCTG GAAGATGATA
AGGGGGAACC GCAATGGCTG A
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| Protein sequence | MAENRIQIVI VADSSKAVKN IRMVSDEFDR FKSSACNSIA GTNSAISSMG AGLASAISLL
QGFAAAMAAA KAAEIGLGFN KEVEDARLGI ATLLAAQGQF VDQQGQQLQG QQRINAAMAY
SADLTRQLQV DNLKTTATFQ QLLKAFQQTL SPGLSEGLSV DQVRQYTLAM VQAASAMQIP
LDMMAEETRS LLKGTITPRN TLIATALGIT PEDIRKLQGD AEGLFTFIMG KLQAFQDFGQ
VTQTTYSGLL SNAQDALANV LGKATEPFFE SLKASLKRFT DYALQVDAVT GNLKLNPELV
NAFELLNDTL RMAIALAESL AKTLGAVGIA YKAMKEAQKA AALQNTPAGF AGPELADFTD
VQRLERVKQL MAKIVEDQQT IANWKAGGIG GSILGAPQIG LANLDISNSV TSLENFRAQM
VAAAQNTEEL DAFLKSLKQS SDAVAAAQET AAGNIGSVRY EAARAAMDLD SFKKKLEEVA
RINLTGLSDD LSKSIEGLKA KIAVALQGGD PRQQAIAAAY TERIRKQATA WELALKENAA
PEVFSAISAQ KQQAEEEAYW GRYLAGAEAV RKTTARGAAS GASPIDIDKI DKDVLQFRER
MQKLYSELED LDSEYRIAQL EQSGRNYDAE AERIDRQAAK RKEAFAKEVA DAEQAYLEME
QKLSGSRGGT AEAWAQLADL KTKYDALKKA AQEYGDKVDR NLQLTKDMKK AEDDAKRAED
LAQLNLEYGK LTGTLQEQLA LQILLLRAEK DRKILAADPE LRAAYERLYA EQERLLRLQR
DGSFMDGLSE GLKKWQREMP TAFGQGLEAI EMLKRGIDSA ADALAEFTMT GKMDFSSFAD
SIIRDILRMQ YKALLTQMFG GEGGLFDWLK GLFGGGGPTT GAYGVETYAG IGHRGGPAES
LPDHRYVASY LFARAPRLHD GLAPDEFPAV LQRGERVLSR RETREYGAAN RAPEVVVNVQ
NKTNTPVTAD KTRAAFDGKR YVVDVILDDY SRGGDIWKMI RGNRNG
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