Gene Sfum_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1743 
Symbol 
ID4459960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2133137 
End bp2133535 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content57% 
IMG OID639702512 
Productheat shock protein Hsp20 
Protein accessionYP_845865 
Protein GI116749178 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.174126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00103153 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAAA AGGAAATGCA GGCCAGAGAA AAGGTTGAGC ACAAGGCGGA AGGAGAGAGC 
ACCCGCGATC TGCCGCTTTT CATTCCCGCC GTGGACATTT ACGAATCGGA CGACGCACTC
ACCCTCGTCG CCGATATGCC CGGAGTCTCC GCGGAAAACG TCACCATCGA CGTGCGCGAC
AATCAACTCA CCGTTCGCGG CTCGATCGAT CTCCCGGACA CAAAGGAGCG CCTGCTCGCC
CAGGAATACG AAATTGGAGA TTACTACCGC CAGTTCGCGC TGGGAAGAAC CATAGACCAG
GCCAGGATAG AAGCCGCGAT AAAGGATGGG GTCCTGACCC TGACCTTGCC CAAGGCCGAC
ATCAACAAGC CGCGCAAGAT TACCGTCAAA ACCGGGTGA
 
Protein sequence
MTEKEMQARE KVEHKAEGES TRDLPLFIPA VDIYESDDAL TLVADMPGVS AENVTIDVRD 
NQLTVRGSID LPDTKERLLA QEYEIGDYYR QFALGRTIDQ ARIEAAIKDG VLTLTLPKAD
INKPRKITVK TG