Gene Sfum_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1742 
Symbol 
ID4459959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2132616 
End bp2133074 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content62% 
IMG OID639702511 
Productheat shock protein Hsp20 
Protein accessionYP_845864 
Protein GI116749177 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.314982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000988198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGTGA TCCGCTGGTA CGATCGCCCT GAATCCACTC CTCGGGCGGG CCAGGCGATG 
GAGCGGTTAC AGAGGGAAGT GAACCGTATT TTCTCGGATT TTTCCGGCCG GGGAGGATCT
CTGCGGGCCG CGGTTTTTCC GCCCATCAAC GTGAGCGAGG ACGAGGAGAA CCTGTACATC
CGCGCCGAGC TCCCGGGGAT TCAGGCCGCG GACATGGAAG TCTCCGTCGA AGGGGATGCC
CTGATGATTC GAGGCGAACG CAAGCTGGAC AAGACCGGGG AGGGTGTCAA TTACCATCGC
CGGGAACGGG AGGGCGGCAG TTTTCGCCGC ATCGTGGCAT TGCCTGTCAG GATCGATCCC
GAGGGCGTCA GCGCGGTCTG CCGGAACGGA GTCCTCTCGA TCGTCCTGCC CAAGGCGCGG
GAAGCGCTCC CCAAACAGAT CACAGTCAAA TCCGACTGA
 
Protein sequence
MAVIRWYDRP ESTPRAGQAM ERLQREVNRI FSDFSGRGGS LRAAVFPPIN VSEDEENLYI 
RAELPGIQAA DMEVSVEGDA LMIRGERKLD KTGEGVNYHR REREGGSFRR IVALPVRIDP
EGVSAVCRNG VLSIVLPKAR EALPKQITVK SD