Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1720 |
Symbol | |
ID | 4459972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2102757 |
End bp | 2103530 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639702489 |
Product | periplasmic binding protein |
Protein accession | YP_845842 |
Protein GI | 116749155 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.740964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.935147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGACGG TATCCCGAAT CATATCGCTT GCGCCGACTC AAACCGAAAT CGTCGCGGCG CTCGACCGGC TGGGCAACCT TATCGGCGTC ACCGAGAACT GCGACTTTCC GGATGGCGTG GAACACATTC CCAGGTTCGG CTCATGGTAC GCCCCCGACC TTCGCCGGGT CATCGCCGCC GCACCCGACC TCGTGTGCAC CTTCGGAAGT CACCACGAGG AAGTGCGGGA CACGCTGCTC GAAGCAGGCA TCAGCGTGGT CCACGGCGAT CCGAAATCGG TGCGGGAATC CCTGGAGGCT ATCCTCGAAC TGGCGGAAAT CCTCGATTGT CAGGATGTGG GGGCAACACT GGTGGAAGGG CTCCAAGAGC GGCTGGAGCG CGTGGACCGC TTCGTCCACG ACACCGGCCC CGCACTGAGG CCGATGGTGT TCCGCATCAT GCACTGGAAA CCGCTCATCA CGGTCGGCTC AGGTTCCTTT CAGCACGATG CCGTCGAGCG GGCCGGCGGC CGCAACCTCA TGGGAGACGG TCCGGCCCCT TACTACGTCT GCGATCCCAC TGCGGTGCGT TCGAGAAACC CCGAGGTCAT CTTCTTTTGC GAACCGTTCA TCAAGCCCCT CCTGGAGAAG GATCCGCTGT GGCGGGAAAT CCGGGCCGTC CGCAACGGCC GGGTCCACGT GTACGACTGC GGCCTGACCT GCCGGTCCGG CCCGCGGATC GTGGACATGG TGGAACGGCT GTGCGAGGCA CTGTATCCGG GTTGCGCACT GTGA
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Protein sequence | MRTVSRIISL APTQTEIVAA LDRLGNLIGV TENCDFPDGV EHIPRFGSWY APDLRRVIAA APDLVCTFGS HHEEVRDTLL EAGISVVHGD PKSVRESLEA ILELAEILDC QDVGATLVEG LQERLERVDR FVHDTGPALR PMVFRIMHWK PLITVGSGSF QHDAVERAGG RNLMGDGPAP YYVCDPTAVR SRNPEVIFFC EPFIKPLLEK DPLWREIRAV RNGRVHVYDC GLTCRSGPRI VDMVERLCEA LYPGCAL
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