Gene Sfum_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1574 
Symbol 
ID4460144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1926204 
End bp1926722 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID639702341 
Productribosomal protein L15 
Protein accessionYP_845696 
Protein GI116749009 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0317141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGTCAA GGAGCTTTAG GCGCTCCGTC TACCTCTATC CGACAGGAAT GGGTGTTTTC 
ATGAAACTTG ACGATCTGGC TCCGGCTCCC GGAGCGAAAA CCAATAGGAA GCGTTTGGGA
CGTGGGTCCG GCTCGGGACT GGGGAAAACT GCGGGACGAG GCCACAAGGG GCAGAAGTCC
CGGTCCGGCG GCGGCACTCC ACCCTGGTTT GAAGGCGGCC AGATGCCCCT GCAGCGCCGG
GTGCCCAAGC GTGGCTTCAC GAATATCTTC AAGACGCGAT ACGAGGTCGT GAATGTCGGT
GACCTGGAGC GCTTTCCGAG CGGGTCCGAA GTCGGACCGG ACGAACTGAG AAAGGTCGGG
CTGGTCAAGA AAATTCGCGA TGGGATCAAG CTCCTCGCCG ATGGCGACAT CGCTTCTCCG
CTCACCATCC GCGTGCATAA GGCCAGTGAT TCTGCGGTCC GGAAGATAGA AGCGGCAGGG
GGCCGCGTGG AGCTGATTCC TTCACAAAAG GGGAACTAA
 
Protein sequence
MKSRSFRRSV YLYPTGMGVF MKLDDLAPAP GAKTNRKRLG RGSGSGLGKT AGRGHKGQKS 
RSGGGTPPWF EGGQMPLQRR VPKRGFTNIF KTRYEVVNVG DLERFPSGSE VGPDELRKVG
LVKKIRDGIK LLADGDIASP LTIRVHKASD SAVRKIEAAG GRVELIPSQK GN