Gene Sfum_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1521 
Symbol 
ID4460606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1880663 
End bp1881424 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content65% 
IMG OID639702287 
Producthypothetical protein 
Protein accessionYP_845644 
Protein GI116748957 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0617436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGT TGGAACTGCT TCTTGTGGGA CTGGCGGCTG TTGCGGGAGG TGCTGTGAAC 
GCCCTGGCCG GAGGCGGAAC CCTGATCACG TTTCCCATGC TGACAGCGGT TGGCGTGCCG
GCGGTGGCGG CCAACGTGAC CAATACGGTG GCCCTGTGCC CCGGGTACCT GGGAGGGAGC
CTGGCGCAGC TGAACGATTT GCGCGGAAAC GAACGAAGGA TGTGGCTGCT CGTTCCCGCC
GGCATGATCG GAGGGATCGC GGGCGGCATT TTGCTGTTGA ACACGGGCGA ACGGGTCTTT
CGGAGCCTTG TGCCTTTCCT GATACTGCTT GCCGCGGGCT TGCTCGCCGC GCAGGACTCG
GTGCGCGCCT GGCTCACGCG TCGTGCGGAG CACAAAGGAT CGGCGCCGCC GCATGAAATG
TGGACGGTGT TGCCGGTCGG CATAGCCGCC GTCTATGGAG GCTATTTCGG CGCAGGGCTG
AGCGTGATCG TACTGGCCGT GCTCGGGCTC GTCATCGATG AATCCCTGAC CAGGTTGAAC
GCGATCAAGC AGGTCATAGC CCTCGTTGTC AACATCGCCG CGGCGGCCTT CTTTCTCTTC
TCCGATCAGG TGATGTGGTC TGCCGCGGCG GTGATGGCGG TGGGCGCGCT GATCGGGGGA
GCAGTGGGAG GCCGCCTTGC GGGAAAAATC CGACCGGCCG TGCTGCGGCG AATCGTCGTG
GCCATCGGCG TGGTGGTGGC GGGGGTCTAC CTGGTCCGCT AG
 
Protein sequence
MGELELLLVG LAAVAGGAVN ALAGGGTLIT FPMLTAVGVP AVAANVTNTV ALCPGYLGGS 
LAQLNDLRGN ERRMWLLVPA GMIGGIAGGI LLLNTGERVF RSLVPFLILL AAGLLAAQDS
VRAWLTRRAE HKGSAPPHEM WTVLPVGIAA VYGGYFGAGL SVIVLAVLGL VIDESLTRLN
AIKQVIALVV NIAAAAFFLF SDQVMWSAAA VMAVGALIGG AVGGRLAGKI RPAVLRRIVV
AIGVVVAGVY LVR