Gene Sfum_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1313 
Symbol 
ID4461114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1622598 
End bp1623044 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content59% 
IMG OID639702082 
Producthypothetical protein 
Protein accessionYP_845440 
Protein GI116748753 
COG category 
COG ID 
TIGRFAM ID[TIGR01909] C_GCAxxG_C_C family probable redox protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000167692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTCAACC AGACGGTGAG AATGATCGAG CTCGCGCAAC AGGGATTCCA ATGCAGTCAG 
ATTCTTGTGA TTATGGGGCT CATAAACCAG GGAAAAACGA ACTCCGATCT GGTCAGGTCC
GTATCGGGCC TGGCAGGAGG TCTCGGGTTT TCCGGCGACA CGTGCGGGGC GCTGACGGGC
GGCGCCTGCC TGTTGGGATT GTACGCCGGA CGGGGAGAGG TGAACGAAGA GGAAGACCCC
CGTCTCAACC TGATGATCGT CGAGCTCGTG GAATGGTTTG CCGGGGAATA CGGCCGAGCG
TTCGGGGGAA CGCGATGTGA AACGATTTTG GGGAACGACC CACGAAACCG GACCGCGAGG
TGCCCGTCGC TGGTGCTCGG TGTATACGAG AAGGTCAATG CCCTGTTGGT GGAAAATGGA
TTCGATCTTG CCACGGGACG CCCATGA
 
Protein sequence
MLNQTVRMIE LAQQGFQCSQ ILVIMGLINQ GKTNSDLVRS VSGLAGGLGF SGDTCGALTG 
GACLLGLYAG RGEVNEEEDP RLNLMIVELV EWFAGEYGRA FGGTRCETIL GNDPRNRTAR
CPSLVLGVYE KVNALLVENG FDLATGRP