Gene Sfum_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1224 
Symbol 
ID4460994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1513342 
End bp1513800 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID639701991 
ProductDNA polymerase III chi subunit 
Protein accessionYP_845351 
Protein GI116748664 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.009619 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.371691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT CGCGAATTCT ATTCGTGGAA ACCGTTGCCG CGGAGCAAAG AAAGCTCCTG 
TGCAACATCG TCGAGCACTT CTACGAGGCC GGGCGGAAAG TGCAGGTGGT CGCCGACTCC
ACGCTCGGCG CACAACACAT CGACCAGATG CTCTGGACCT TCTCCGACCG CAGCTTCGTT
CCGCACCGGA TTCTCGATCC GGGGCGAGGC ACGCCGCTTG AACCGGTGGT CATCACCGTG
GGGGAACGAA TTCTGGACGG GTTCGACACC GTCGTTTGCG ACGCCGAATG CCGCCTTGAT
TTCATGACGG CGTTCGAAAC GGCGGTCCAC TTCGTCATCA GGGATGACGT CGACCGGCGT
CTGCAGAGCC GACGCATGTG GACGGAGGCC CGGGACCGCG CGCTTGCGGT ACGGCACGTG
CCGTATGCCA CCGGCATGGA TTTGAAAGGT CTTGTGTAG
 
Protein sequence
MAESRILFVE TVAAEQRKLL CNIVEHFYEA GRKVQVVADS TLGAQHIDQM LWTFSDRSFV 
PHRILDPGRG TPLEPVVITV GERILDGFDT VVCDAECRLD FMTAFETAVH FVIRDDVDRR
LQSRRMWTEA RDRALAVRHV PYATGMDLKG LV