Gene Sfum_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1210 
Symbol 
ID4460635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1496317 
End bp1497156 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content63% 
IMG OID639701977 
Producthypothetical protein 
Protein accessionYP_845338 
Protein GI116748651 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.571993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAG TAAAAGATGT CATGGACTGG GTGGATGCTT ACGCCCCCTT TCGCTTCAGT 
GCCGGGTGGG ATCGTTGCGG TCTTCAGGTC GGCGACCCGG AAGCGGAACT GAGCCGGCTG
CTGGTGGCGC TGGACCCCGG TTCGACCACC CTTGGGGAAG CCTTGAGCCT GAAATGCCAG
TGCGTGGTCA CGCACCATCC TCTGATCTTC CAGCCCCTTG AGTCCGTACG AGCGGATGTC
TTTCCCGGCA AGCTGATCAT GACCGCGGTG AGGGAAGGAA TCAGCCTGAT TTGCGCCCAT
ACCAATCTCG ATGCCGCACG AGCAGGCACC AACGAACAGT TGGCGCGGGT CTTCGCGCTG
CAGGGCGTGA CCCCGCTCGA AATTGACGCA GCCTGGCAGG ATGAGCCGCG GTATGCGGGA
ATGGGGTGTG TCGGAGAATT GCCTGCGGAG ATGTCACTCG ACGGCCTGGC TTCCTTTGCA
GCCGCGGCGA TGGGCGGTGG TGCCGTTCGG GTCGTGGGAG AACCGGGTCG CTCGGTGCGA
CGTGTCGCCG TTTGCACGGG GAGCGGGGGC GGGCTTCTCG ACGCCGTGAT TACCGGGAGA
GCGGATGTGT ACATTACCGG CGACGTGAAG TATCACGACG CCATGCGCGC CGAAGAGCAC
GGTCTTGCCG TGATCGATAT CGGGCACTTC TCCTCGGAAC GGGTCGTGCT TCAACCCCTG
GCGGAGTATC TGCGGTCCCG TGCAGTGGGA CAGGAGGCCG GGCTGGAGGT TTTTGTGGCG
CGCAGGGAAA AGGATCCCCT GCGCATTGTG GGAAGTGCCG TTGAGCCGTT GTCGCCCTGA
 
Protein sequence
MPKVKDVMDW VDAYAPFRFS AGWDRCGLQV GDPEAELSRL LVALDPGSTT LGEALSLKCQ 
CVVTHHPLIF QPLESVRADV FPGKLIMTAV REGISLICAH TNLDAARAGT NEQLARVFAL
QGVTPLEIDA AWQDEPRYAG MGCVGELPAE MSLDGLASFA AAAMGGGAVR VVGEPGRSVR
RVAVCTGSGG GLLDAVITGR ADVYITGDVK YHDAMRAEEH GLAVIDIGHF SSERVVLQPL
AEYLRSRAVG QEAGLEVFVA RREKDPLRIV GSAVEPLSP