Gene Sfum_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1144 
Symbol 
ID4460222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1420429 
End bp1421331 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content62% 
IMG OID639701911 
Producthypothetical protein 
Protein accessionYP_845272 
Protein GI116748585 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.617976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT TCATTGCTTC GTTCGTCGGC GCGCTCTGTT TCTGGATCGG CCTCTCGGCG 
TTCATCGAAT CCGCAGCGGC CCAACCCGGC AGCATCACAT GGAAGGAACC GCTCACCGGC
ATGGAATTCG TCCGGATACC TGCCGGGTGT TTCGAATTCC GTTGTCCCGC GGACACCGGC
CGATCCTCTT CTTCAACCCT CTGCACCGGC GGCTTTTGGC TCGGAATACA CGAGGTCACC
CGCGGACAGT TCAGAGTTTT CATCGAGGCG ACGGGCTACC GCACGGACGC CGAAAGGGAG
GGCTTTTCGT GGGCGTACTC CGGACAGTGG GAAAAGAGGG CCGGACAGGA CTGGAGGAAC
TCAGGATTTC CCCAGGATGA CCGTCATCCC GTGGTGAACG TCTCCTGGAA CGATGCGAAG
GCGATGGCCA AGTGGCTCTC GGAGAAGAAT CGGGAGCATT TTCGGTTGCC CACGGAATCG
GAGTGGGAAT ACGCATGCGG CGATCGGCAG TCAGCCGAAT CATCGCCGGA TGCGGAATCC
GTGTGCCGGC AGGCCAACGT CGCCGATGCA ACCGCCCTGG AGTCCTTTCC TGCCTGGAAA
ACCCGCGCGT GCCGGGACGG TCACGTCCAC ACGGCACCGG TCGGCAGCCT GCGGCCTGAC
CGGTTCGGGT TGTACGACCT GGTGGGAAAC GTCTGGGAAT GGTGCGAAGA TGTGTGCATT
TCCGGAACCG GGTCCGACCA TGCAATGAAC AAAGTCGTAC CGGCGAAGCA TTCGATCCGG
GTGGTCCGCG GCAATGGATG GAACAGCGGG CCGGGTCTGC GCGGCTGCGC CGCCAGAGAG
ACGCTGCAGG TGCCGGAGCG TCGCGGCAAC GATGTGGGAT TTCGTTTGAT GCGCGCACCT
TAA
 
Protein sequence
MKRFIASFVG ALCFWIGLSA FIESAAAQPG SITWKEPLTG MEFVRIPAGC FEFRCPADTG 
RSSSSTLCTG GFWLGIHEVT RGQFRVFIEA TGYRTDAERE GFSWAYSGQW EKRAGQDWRN
SGFPQDDRHP VVNVSWNDAK AMAKWLSEKN REHFRLPTES EWEYACGDRQ SAESSPDAES
VCRQANVADA TALESFPAWK TRACRDGHVH TAPVGSLRPD RFGLYDLVGN VWEWCEDVCI
SGTGSDHAMN KVVPAKHSIR VVRGNGWNSG PGLRGCAARE TLQVPERRGN DVGFRLMRAP