Gene Sfum_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0968 
Symbol 
ID4461188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1190228 
End bp1191385 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content56% 
IMG OID639701731 
Producthypothetical protein 
Protein accessionYP_845099 
Protein GI116748412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCGA GAGAGAAATT CGAGAGAAGC CTGCTGGCCG TTGAAAAGTG GGTTGAATCG 
CATGATTACA AGGGGTACGA CCCTTCGGAC GGGTTGTCGT CCTTTTTGCG GGTCCTGACG
TTCAACAACA CCCTTCTGGA AAGGATGCTT CAGCAGGTTG GGCGGCAGAG TCCGGTGAAC
CTGAGGCCTC TCATGGGCAT CAGGCCCCTT GAGTCGACCA AGGGGAGGGG GTACATGGCG
TGGGGCTATC TGGCACGATA CAGGCTCACC GGTGCCGAAG AGTACAAGGA GAAGGCGCTT
CTTTGCCTGG ACTGGCTCGA CCGCAACAAA TCTCCGAGAT ACGCGCATCA CAGCTGGGGG
AATCATTTCG ATTACGCGAG TCGCGGGGGC AGAATGCCCA AGCATGAATC CACCATTGTC
TGGACCGGGC TCATCGGCCA GGCGTTCCTG GAGGCCTACG AGCTTTTCGG ATTGGAACGG
CACCTTGAAA TCATAAAAAG CATCACCAAC TGGATTCTGA GTCTTCCCAG GGAAAAGACC
CCCCTGGGTA CGTGCCTCAG CTACGTCGCG TTCAAACAAA GCTCAATTCA TAACTCCAAT
ATGATCGGGG CGGCCTTTCT CGCGGGAGCC GCGCGATGCA CGGGTGACCG GGAGGCGCTC
GAAACGGCGC GCCAGGCGAT GGAGTATGCG TGCGGTCACC AACGCGCCGA TGGGGCCTGG
TATTATGGAG CGGGCGAGAA GTACCGCTGG ATCGACAACT TCCACACGGG CTACAATCTG
GACAGCCTTA AAAGGTATAT CCGGTTCAGC GCAGACCGGA CATTTGCCGA CAACCTCAAA
AGGGGAATCG ACTACTACAG CAGAACGTTC ATCGAGGATG ACGGCTTCCC GAAATATTAC
GCTCAACGCG CCTATCCGCT GGACATTCAA TGTGCTTCCC AGGCGATGGA GACGCTCGCC
TTCTTCGCCG AGGATAATCC CGGAAACCTC GGCCAGGCCT GCAAAGTGGC GAATTGGACC
ATAGACAACA TGCAGGACCG GGACGGGCAC TTCTACTATC GAATGTACCC GTTGGGGATC
AAAGCCAAAG TACCTCTGAT CCACTGGGGA CAAGCCACCA TGTACAGGGC TCTCTCCTAC
TTGTTGACCA GACTGTAG
 
Protein sequence
MSSREKFERS LLAVEKWVES HDYKGYDPSD GLSSFLRVLT FNNTLLERML QQVGRQSPVN 
LRPLMGIRPL ESTKGRGYMA WGYLARYRLT GAEEYKEKAL LCLDWLDRNK SPRYAHHSWG
NHFDYASRGG RMPKHESTIV WTGLIGQAFL EAYELFGLER HLEIIKSITN WILSLPREKT
PLGTCLSYVA FKQSSIHNSN MIGAAFLAGA ARCTGDREAL ETARQAMEYA CGHQRADGAW
YYGAGEKYRW IDNFHTGYNL DSLKRYIRFS ADRTFADNLK RGIDYYSRTF IEDDGFPKYY
AQRAYPLDIQ CASQAMETLA FFAEDNPGNL GQACKVANWT IDNMQDRDGH FYYRMYPLGI
KAKVPLIHWG QATMYRALSY LLTRL