Gene Sfum_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0967 
Symbol 
ID4461187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1189299 
End bp1190165 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content55% 
IMG OID639701730 
Productglycosyl transferase family protein 
Protein accessionYP_845098 
Protein GI116748411 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA CCTACGTATT GATCACCCCC GCACGGAACG AGGAGAAATA CATCGAGGGG 
GTCATTCGAT CGGTGTCGGC ACAAACCGTT CTTCCGCGGG AATGGGTCAT CGTGAGTGAC
GGGTCCACCG ACCGAACGGA CGACATCGTA CAAGACTATG CGAGAACGCA CGAGTTCATC
CGGTTCACCC GCATGCCCGA TCACCGCGAC CGCAGCTTTG CCGCGAAAGT CGCTTGCTTC
AACGCCGGAT ACGCGCTTCT CAACGGCCTC GAATACGATA TTCTGGGGAA CCTTGACGCC
GATATCACCT TCGAGCCCGA CTATTTCGAA TATCTTTTGA ACCGGTTTGC CGAAAACCCG
AAACTGGGTG TGGGAGGGAC TCCTTTCGTC GAAAAAGGTC AACACTACGA CTACCGGTTC
ACGAATATCG AGCATGTCTC GGGGGCCTGC CAGATGTTCA GGCGGCAATG CTTCGAGAGC
ATCGGGGGGT ACAAGCCGAT CGCGGGCGGC GGCATAGACT GGGTGGCCGT CACGAACGCT
CGAATGACGG GATGGGAGAC ACGCACCTTT GTCGAAAAGA CCTGCGTGCA TCATCGAAAA
ATCGGGACCG GCACGGTCGG TCCGTCCATG CTTTCCTTCA AACAGGGGCG CAAGGATTAC
TTCCTGGGCA ATCATCCCTT GTGGGAGATC TTCAGGGCTT TCTACCAGAT GACCAGGAAG
CCTCATGTCA TCGGGGGAGG CTTTCTCCTG CTCGGCTATT CGTTTGCGGC CCTCCAGAAG
ATACCTGTCC CGATCTCAAA AGAACTGGTC GATTTCATTC GCGGAGAACA ACTGCAAAGA
TTGAAAAAAT GCTTTCGGCT TGCATAG
 
Protein sequence
MNMTYVLITP ARNEEKYIEG VIRSVSAQTV LPREWVIVSD GSTDRTDDIV QDYARTHEFI 
RFTRMPDHRD RSFAAKVACF NAGYALLNGL EYDILGNLDA DITFEPDYFE YLLNRFAENP
KLGVGGTPFV EKGQHYDYRF TNIEHVSGAC QMFRRQCFES IGGYKPIAGG GIDWVAVTNA
RMTGWETRTF VEKTCVHHRK IGTGTVGPSM LSFKQGRKDY FLGNHPLWEI FRAFYQMTRK
PHVIGGGFLL LGYSFAALQK IPVPISKELV DFIRGEQLQR LKKCFRLA