| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0754 |
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| Symbol | |
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| ID | 4461690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 923341 |
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| End bp | 924294 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701516 |
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| Product | TonB family protein |
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| Protein accession | YP_844887 |
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| Protein GI | 116748200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.278027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCTT TGACTTGTAC ACCTCGCAGG TTGTCGAAGG GAGAGTTCCT CACCGGTGTG
GGGGGCTCCA TTCTCGTACA CATTGGTGTG ATTGTGCTGG CGGTGGCGGT CTCCTGGCAT
ATACCGAAAA AGGGTGTCGC TCCCGCTTTC ACGACGGTCA ATCTGGTCTC CATGCAGGAT
GTCGCCGGAG CGGCTCCGAA GAAGGGGCTT CAGACCAAGG GAGCCGAAGG GCCGCGGACT
CAGGAGGCCG CCAAGCCGGT TCCGACTGCG AAGCCGGGGC CGATGGTCCC GATCAGGCGG
CTGCGCATGG AAGATCCGGT CAAGAAGACC GAACCGGAAA TCAAGAAAAT CGAATCCCGC
GATATTCCCA AGGTTGCGGA GACCGCTCCC GCCTCGATGT CGGTGGAAAA GAGCCTGGAA
AAGCTGATTC CCAAGCCCAA GGCACCCGCA AAACCCGCCC AGGCTGCCCA GGCGTCGAGC
CAGGAACCGT CGGCCGCTCC ACAGGAACAG CGACAGGCCA GGGTCAAACC GTCCTCGACC
CAGGAAAATC CGGCACAGGG CAATCCCCGT GGCGCCGTGG ACGGACATGC CGGGGGAACG
GCCGACACCA CAGCGCGCGG CAACCCCGAA GCGTCGGGAA AGGCCGACGG CGGGCGGGTT
GCTTCCGCCT TGCTGGCTCT GTACGCAAAC CAGGTCAAGA ACGCGATCAA CTCCCAGTGG
TCGATCCTGG ATTCGCTCAA GAGCACGCGT CTTGAGGCCA GGCTCCTGAT AGCGGTGAGC
CGGGACGGAC GGGTGCTCGA TCTGCAGGTG GAGAAACCCT CGGGCAACGG CCTCTTTGAC
GAGGCGTGCG TGAGGGCGGT CCGCAAAGCC GCGCCTCTTC CCCCGATTCC CGAGACCTAC
ACAAGTCCGA GAATAGAATT CGTCATCAAT TTCAGGCCGG AAGGATTATC TTGA
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| Protein sequence | MESLTCTPRR LSKGEFLTGV GGSILVHIGV IVLAVAVSWH IPKKGVAPAF TTVNLVSMQD
VAGAAPKKGL QTKGAEGPRT QEAAKPVPTA KPGPMVPIRR LRMEDPVKKT EPEIKKIESR
DIPKVAETAP ASMSVEKSLE KLIPKPKAPA KPAQAAQASS QEPSAAPQEQ RQARVKPSST
QENPAQGNPR GAVDGHAGGT ADTTARGNPE ASGKADGGRV ASALLALYAN QVKNAINSQW
SILDSLKSTR LEARLLIAVS RDGRVLDLQV EKPSGNGLFD EACVRAVRKA APLPPIPETY
TSPRIEFVIN FRPEGLS
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