| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0552 |
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| Symbol | |
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| ID | 4461203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 671325 |
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| End bp | 672548 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701308 |
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| Product | major facilitator transporter |
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| Protein accession | YP_844686 |
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| Protein GI | 116747999 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.929363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG ACGATCCATC GTTGAAGTCC ACCGTGGCCT TTGTCCGTCT TCTTTTCCTG
TGCTGTATCG TATGCTTTTT TTGTTATGTC GGCGCGTACA TGCGGGTTCC GGTGGTTCCA
CTGTTTGCGC TGTCCCTGGG CGCGGATGCG TTCGAAGTCG GATTGATCAA TTCTTCCTTT
CTTTTCATGG CCGCGCTTCT TTCACTTCCA CTGGGAATAG TGTCGGATCG GCTGGGCAGG
AAGTCCCTCA TTCTGGGAGG AATTCTACTG ACGTCACTGA GCTCCTTTCT CCTCTGCCTG
TGTCGAAATC CCATGCAGAT GGTCCTCGTT TACCTCCTGT TCGGGGTCGG CTTGGCCGCT
TTTGCCCCGA CGTTGATGTC CTACGTTGCC GATTTCGCTC CCGCGACGCA CCTGGGGCGC
TCCTACGGTT ACTACACCAT GGCACTGTAC GGAGGCATGA GCCTGGGACC CGCATTGGGC
GGAGCCCTCG CGGAGGTCAC GGGTTACCCG GCCGTGTTCG CGATTTCGGG AGGTTTCGGA
TTCCTGATGT TCTGCCTTGT CCTGGTGTTG CTGCCCCGGA CACCCCGCAC CGCCGCCCAC
TCTTCCCGAA AGCTCGACAG CATGGCCGTC GCGGGGACGT TCCTCACCAA TCGTCCTCTC
CTCGGCTGCT GGATGGGGAC CCTCGGGGGG TGTTTCGGCC TGGGGATGTT CGTGACTTTT
GTTCCCCTGC ATGCCGCGGA ACAGGGCATA TCGGTGGCGA GCATCGGCCT CATTTTTGCC
TCGCAGTCGC TTTTCAACGC GGTTGCGCGG ATCCCGTTCG GCCACTTTAC CGATCGAGTC
AAGGACCGCG GTGCCGTTGT GGTCTTCGGG CTGATCGGCT TCTCGATCGC CGTTTCGGGG
ATCGCATTCT CGACCGGCAT TTTTCACTTC ATCGGCTTTT CGATCGCACT CGGGATCACC
ATGAGTCTGA CGTTCACCGC GCTGGGAGCG CTCATATCCG AGGTGGTCCC GCATGATAGC
CGCGGGCTCG CCATGGGAGG CTACAGCACC TGCATCTACC TTGGAATGAT GCTGAGCGCC
GTGAGCATGG GCGCACTGGC CCGCGACCTG GGATTCAAGA GCGCGTTTTT GGTCACGGCC
GGGGTCATCG CATTGACGGG CGTCGTCTTC CGGGCCTTTG TGACCAGGAT TCCGCCTTCC
CCATCGGCCG GGAATCTGTT ATAG
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| Protein sequence | MNPDDPSLKS TVAFVRLLFL CCIVCFFCYV GAYMRVPVVP LFALSLGADA FEVGLINSSF
LFMAALLSLP LGIVSDRLGR KSLILGGILL TSLSSFLLCL CRNPMQMVLV YLLFGVGLAA
FAPTLMSYVA DFAPATHLGR SYGYYTMALY GGMSLGPALG GALAEVTGYP AVFAISGGFG
FLMFCLVLVL LPRTPRTAAH SSRKLDSMAV AGTFLTNRPL LGCWMGTLGG CFGLGMFVTF
VPLHAAEQGI SVASIGLIFA SQSLFNAVAR IPFGHFTDRV KDRGAVVVFG LIGFSIAVSG
IAFSTGIFHF IGFSIALGIT MSLTFTALGA LISEVVPHDS RGLAMGGYST CIYLGMMLSA
VSMGALARDL GFKSAFLVTA GVIALTGVVF RAFVTRIPPS PSAGNLL
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