Gene Sfum_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0514 
Symbol 
ID4461626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp621967 
End bp623163 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content58% 
IMG OID639701270 
Productouter membrane protein 
Protein accessionYP_844649 
Protein GI116747962 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTG CCGGTAGGCG GAATCGCAAG GACCCGTTGA ATCCTGTTCT CGAGGAGTAC 
GGGGAAACCG GGATGATCCC GGTTTCCGGA AGCGGCCTTA TGAGAAAATC GATAATCCTT
TTTCTTGTTG TTGTGTTGGG GACCGCCTTG TTTTTTTCCT GCATGCACAA TCCCGCGCCT
TTCGATGAGG CGAAGTGGCG CCGGCAGGTC GACGCTCAGA GCGTCGAACA GCTCTACGCG
CCGCATTTCA ACGACGGGCG CTACTTCAAC CCCTGGGCGC CCATGGAACA CGGGGGATTC
TGGCGTCTGG TGAAATGGAA GATGTCGAGC AAGGCGCACT ATTCGGAGGA AGAAAAGAAT
CACCGGCCGA AATTCATCCC GGAGTTGAAG GCGCGGATTC AAGGGATGCC CGAAGGCGAT
TTCATCGCGT GGATCGGGCA CAGCACATTT CTGTTGAGAA TAGGCGGGGA CTACTGGATC
ACCGACCCGA TCTTCTCGGA AAGAGCGTTT CTTCCCAGGC GGATCACTCC TCCGGCGATC
ACCGGCGAAG AGTTGAAAGC CCTGGCGCCC TCCTTGAATG TGCTGATTTC CCATAACCAC
TACGATCATC TCGACGAGGA GAGCGTTCGT TCCCTGCCCC GGGCTTCACG GTTTTACGTT
CCGCTCGGTC TCGGGAATCA CGTGGCGTCA CTTCACGAAG GCGCGGTTCA GGAGCTCGAC
TGGTGGCGGG AAATCGATTT GGGAGGTGGG AACAAGCTCG TCTGCCTGCC GGCGCAACAC
TGGTCCAGGC GATTCGGTCA GGGGTTCAAC GAAACCCTGT GGGCCGGTTT TCTTCTGATC
ACTCCGGAGA TTTCCGTCTA TTACGGTGCG GACAGCGGTT ATTTCATCGG CTACAGGGAA
ATCGGAAGAC GATACCCGAA CATCCACTAC GCCCTGCTGT CGACCACGGC GTACCATCCA
CGATGGTTCA TGCACTACGC GCACAAGAGC ATCCCGGAGG CGCTGGACGC CTTTCACGAT
CTCGGGGCGC GGTATTTCAT CCCCACACAG TGGGGAACCT TCCCGCTGGG CGATGAACCT
CCGGGTTATC CGGCCCTGGA CCTCATGAGA ACCATTCAAG AAAGGAAACT CGACCCATCC
CGGTTTCTCG TCCTGGACAT CGGAGAGATC CGCCCCCTGC GTGGAGCGCG GGAGTGA
 
Protein sequence
MAFAGRRNRK DPLNPVLEEY GETGMIPVSG SGLMRKSIIL FLVVVLGTAL FFSCMHNPAP 
FDEAKWRRQV DAQSVEQLYA PHFNDGRYFN PWAPMEHGGF WRLVKWKMSS KAHYSEEEKN
HRPKFIPELK ARIQGMPEGD FIAWIGHSTF LLRIGGDYWI TDPIFSERAF LPRRITPPAI
TGEELKALAP SLNVLISHNH YDHLDEESVR SLPRASRFYV PLGLGNHVAS LHEGAVQELD
WWREIDLGGG NKLVCLPAQH WSRRFGQGFN ETLWAGFLLI TPEISVYYGA DSGYFIGYRE
IGRRYPNIHY ALLSTTAYHP RWFMHYAHKS IPEALDAFHD LGARYFIPTQ WGTFPLGDEP
PGYPALDLMR TIQERKLDPS RFLVLDIGEI RPLRGARE