Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0471 |
Symbol | |
ID | 4460280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 565616 |
End bp | 565978 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639701227 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_844606 |
Protein GI | 116747919 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00988083 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000661434 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAGTCTCG AGGTTTATTG GGAGGAGCAC AGGCCTGTTG TGGAACTGGG GGGAGTTCTC GACCGCGAGT CGGTCCCCGG CATCAGGAAG GTCCTGTTGC GTCTGGTGAA GGCTAAGGGG ATCAAGGACT TGCGTATCGA CCTTGCGGAA GTCGAGAGGA TGGACACCTC CGGTGTCGCC ATGCTGGTGG AGGTTTTAAG GGTCCTTTCG GCAAGGAAGG GGAAAGTGCA CTTGACCAAC CCGAGCGAAC CCGCCACGCG GATGATCCGA CTGGCGCGCC TCAACGGGGT CTTCGAGCAG GGCGCCTCGG GGCCATTGGC CGCCTCCGGC GCAGGCCCGC AGCGGCGCGA TTCTCGCGGG TGA
|
Protein sequence | MSLEVYWEEH RPVVELGGVL DRESVPGIRK VLLRLVKAKG IKDLRIDLAE VERMDTSGVA MLVEVLRVLS ARKGKVHLTN PSEPATRMIR LARLNGVFEQ GASGPLAASG AGPQRRDSRG
|
| |