Gene Sfum_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0471 
Symbol 
ID4460280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp565616 
End bp565978 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content64% 
IMG OID639701227 
Productanti-sigma-factor antagonist 
Protein accessionYP_844606 
Protein GI116747919 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00988083 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000661434 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTCTCG AGGTTTATTG GGAGGAGCAC AGGCCTGTTG TGGAACTGGG GGGAGTTCTC 
GACCGCGAGT CGGTCCCCGG CATCAGGAAG GTCCTGTTGC GTCTGGTGAA GGCTAAGGGG
ATCAAGGACT TGCGTATCGA CCTTGCGGAA GTCGAGAGGA TGGACACCTC CGGTGTCGCC
ATGCTGGTGG AGGTTTTAAG GGTCCTTTCG GCAAGGAAGG GGAAAGTGCA CTTGACCAAC
CCGAGCGAAC CCGCCACGCG GATGATCCGA CTGGCGCGCC TCAACGGGGT CTTCGAGCAG
GGCGCCTCGG GGCCATTGGC CGCCTCCGGC GCAGGCCCGC AGCGGCGCGA TTCTCGCGGG
TGA
 
Protein sequence
MSLEVYWEEH RPVVELGGVL DRESVPGIRK VLLRLVKAKG IKDLRIDLAE VERMDTSGVA 
MLVEVLRVLS ARKGKVHLTN PSEPATRMIR LARLNGVFEQ GASGPLAASG AGPQRRDSRG