Gene Sfum_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0470 
Symbol 
ID4460279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp564764 
End bp565288 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID639701226 
Productnitroreductase 
Protein accessionYP_844605 
Protein GI116747918 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0140295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000457021 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTGGGG TTACGACTGA AACGGATACG ATCCGGACAA TACTTGCCCG CCGCAGCGTC 
CGGCAATTCA CGGATGCCGC CGTCGACCGC AGGTTGATCG TGGAAGCTTT GCGAGCCGCT
TCGTGGGCGC CCTCCGGTCT GAACAACCAG CCATGGCGTT TCGCACTCGT GTGGGAACCC
GTGCTGAAAG ACAAGATAGG CGCCTTGACT CGGTATGCGA CGGTTCTCAG GTCTTCCGCG
GTATTGATTC CCGTGTTCAT GGACAAAGAG AGCTCCTATG ACTACGTGAA AGACTGCCAG
GCTGTCGGCG CGTGCATCCA GAACCTGCTG CTCGCGCTCC ACTCGCTTGA GCTCGGGGCG
GTCTGGATCG GAGAGATACT CAAGAACAAG GAGAAAATCC TTGAAGTACT GGAACTGCCC
GAACGCCTCG AGCTCATGGC GGTAGTCGCG GTCGGCGTGC CGGCCCACCG GAACCAGACT
TCCCACCGGC GCCCGTTGGA AGAGCTCATT TTACTCGAAA GGTAG
 
Protein sequence
MSGVTTETDT IRTILARRSV RQFTDAAVDR RLIVEALRAA SWAPSGLNNQ PWRFALVWEP 
VLKDKIGALT RYATVLRSSA VLIPVFMDKE SSYDYVKDCQ AVGACIQNLL LALHSLELGA
VWIGEILKNK EKILEVLELP ERLELMAVVA VGVPAHRNQT SHRRPLEELI LLER