Gene Sfum_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0379 
Symbol 
ID4461612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp452982 
End bp454280 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content63% 
IMG OID639701134 
Productphenylacetate--CoA ligase 
Protein accessionYP_844514 
Protein GI116747827 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.69725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA GTTTCATGCC GGTCCGGGCA TCCCGCGAAG ACTTGCATGC CCTTCAGCTG 
CAGGGACTGC AGTGGACCGT TTCCCATGCC TATCGTAATT CCCCTTTCTA CCGTGCAAAA
CTGGATGCCG CCGGGGTCGG CCCCGACGCG GTCCGCTCCC TCGACGACCT GAGCCGGCTG
CCTCTCACCA CCGCGTCCGA CCTGAAGGAT GGTTATCCTT TTCCACTTCG GTCCGTGCCT
TTCGAGAAAA TCGTCCGCAT CCACGCCTCA TCGGGAACCA CGGGCAAGCG CAAAGTGCTG
TGCTATTCGC AAAAGGACAT CGACGACTGG GCCTGCATGT TCGCCCGGTG CTACGAGATG
GCCCGGCTGA CGAGAGAAGA CCGGGTGCAG ATCGCGGTCG GCTACGGCCT GTGGACGGCA
GGGGTCGGCT TTCAGCTGGG GTGCGAGCGG TTCGGAGCCA TGGCCGTTCC CATTGGGCCG
GCCAACACGG AAATCCATTG CCAGATGCTG CTGGACATGC AGAGCACCGT CTTTTGCGCC
ACGGCGTCCA TGGCGCTGCT CATTGCCGAG GAAATCGAGC GGCGGGGCAT CCAGAAGAAG
ATCGCTCTGA AGAAATTCAT CTTCGGGGCC GAGCGTCACA GCGCGGGGAT GCGCCGCAGG
ATCCGCGAAA TCACCGGAGT GAACGAACTC TTCGATATTC CCGGGCTGAC CGAGCTGTAT
GGGCCCGGAA CGGGGCTGGA ATGCCCCGCT CACGAGGGGG TGCATTACTG GGCCGACTAC
TACATCCTCG AAATCCTCAA CCCGGAGACC CTGGAACCGG TTGCGCCGGG CGAGGTGGGC
GAGATGGTGG TCACGACGCT CCGCAAGGAG GCCGCCCCGC TCATCCGGTA CCGTACCAGG
GACCTGACCC GCCTCATCCC CGGGGACTGT CCCTGCGGAA ACCCGCTGCC CCGGCACGAT
CATCTCCTGG GAAGGTCTGA CGACATGTTC ATCTTCCGTG CGGTGAACAT CTACCCGGGG
CAGATCGATC ACGTGCTGTC CCAGATTTCG GGCATCGGGA GCGAATACCA GGTGCACCTG
TACCGCCGTG AAGACGGCCG GGATGTGATG CTGGTGAAGG TTGAACAAGT CGGGAGCGAC
TCCCCCGACG CGGACAGGAA GCTTGCGGAA ACGGTCGCGG CCGAGGTCCG CCGACAGATC
ATGGTGCGTT GCCAGGTGGA AATCCTCGAA TACGGCACCC TCCCCCGCAC AGAGCGCAAG
AGCAGGCGCG TTTTCGATCA TCGAACCGTC GAGGATTGA
 
Protein sequence
MSVSFMPVRA SREDLHALQL QGLQWTVSHA YRNSPFYRAK LDAAGVGPDA VRSLDDLSRL 
PLTTASDLKD GYPFPLRSVP FEKIVRIHAS SGTTGKRKVL CYSQKDIDDW ACMFARCYEM
ARLTREDRVQ IAVGYGLWTA GVGFQLGCER FGAMAVPIGP ANTEIHCQML LDMQSTVFCA
TASMALLIAE EIERRGIQKK IALKKFIFGA ERHSAGMRRR IREITGVNEL FDIPGLTELY
GPGTGLECPA HEGVHYWADY YILEILNPET LEPVAPGEVG EMVVTTLRKE AAPLIRYRTR
DLTRLIPGDC PCGNPLPRHD HLLGRSDDMF IFRAVNIYPG QIDHVLSQIS GIGSEYQVHL
YRREDGRDVM LVKVEQVGSD SPDADRKLAE TVAAEVRRQI MVRCQVEILE YGTLPRTERK
SRRVFDHRTV ED