| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0311 |
|---|
| Symbol | |
|---|
| ID | 4461662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 373875 |
|---|
| End bp | 374588 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639701066 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_844447 |
|---|
| Protein GI | 116747760 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.382743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.470316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TTCAAACACA TCGTCTCGTC AAGGCCTTCG GCGGCCTGCT CGCCGTCAAC
GACCTGACTT TTGAGGTCGA GAAAGGGGAA ATATACGGCT TGATCGGTCC AAACGGTTCC
GGCAAGACGA CCGTTTTCAA CCTGATCACC GGTTACTACC CGATCACTTC CGGTTACATC
GAGTTCCAGG GGAAGAGACT CAACGGCCTG CCGACCTGGA GGGTCTGCAA GCAGGGCATC
GGGAGGACTT TCCAGATCGT GAAGCCCCTG CGTCGAATGA CGGTGCTCGA AAACGTCATG
ACCTCCGCCT TCAACAGGAC TTCACGGGAG GCGGAAGCCC GTGAAAAAGC CCTGGAAGTG
CTGGATTTCT GCGAACTGAC CAAAAAGCAG GACTATCCCG CAAAAGGCCT CACCATCGGC
GACCGCAAGC GCATGGAGAT CGCGCGGGCG CTTGCCACCG CCCCCGAGCT GCTCCTGCTG
GACGAAACCA TGGCCGGCCT GACGCCCCAG GAGCAGGCCG ACGGCGTCCA ACTGATCCGC
AAGGTCCGCA ATTCCGGAAT CACGATCATC ATTGTCGAAC ACATCATGCA CGTGATCATG
AACTTGTGCG ACCGCATCCT TTGCATCAAC TACGGTCAGG AGATCGCACG AGGAACGCCG
GCGGAAGTGG CCAACAATCA AGCCGTTATC GAGGCGTATC TGGGAAAGGA ATAG
|
|---|
| Protein sequence | MNFFQTHRLV KAFGGLLAVN DLTFEVEKGE IYGLIGPNGS GKTTVFNLIT GYYPITSGYI
EFQGKRLNGL PTWRVCKQGI GRTFQIVKPL RRMTVLENVM TSAFNRTSRE AEAREKALEV
LDFCELTKKQ DYPAKGLTIG DRKRMEIARA LATAPELLLL DETMAGLTPQ EQADGVQLIR
KVRNSGITII IVEHIMHVIM NLCDRILCIN YGQEIARGTP AEVANNQAVI EAYLGKE
|
|---|
| |