| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0029 |
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| Symbol | |
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| ID | 4461340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 40678 |
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| End bp | 41406 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639700781 |
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| Product | ABC transporter related |
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| Protein accession | YP_844167 |
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| Protein GI | 116747480 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000212578 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.439492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAAC ACTTGATCGC GGCAAAGGAT TTGCGACTCC GGCTGGACGG GCGGGACATC
TTCCATATCC CGGAGTTTTC CCTTCAGCGG GGGGAAGTCC TGGCGCTCGT CGGTCCCAAC
GGTTCCGGCA AGTCCAGCCT TCTTCTCACC CTCGCCCTGC TTCAGGAGCC GACGGAGGGG
ACGGTACGCT TTGACGGCCG TCCGGCGGGC AGGGACAATG CCCTGGCGTT GCGCCGCCGC
ATGGCGCTGG TGTTCCAGGA GGCTTTGCTG CTGGATGCCA CGGTGCGCCG CAACCTCATG
ATCGCACTCC GCCTGCGGGG AGTCACGGGG AGGGAGGCCG AACAGCGGGC CAATCGCTGG
CTGGATCGTT TCGGAATCGC CCATCTCGCT TCCCGAAAGG CGCGTCGGCT TTCAGGCGGC
GAAGCTCAGC GAACGAGCCT GGCCCGCGCA TTTGCCCTGG AGCCGGAAGT CCTTTTCCTG
GACGAACCCT TCGCTTCGCT CGATTATCCC ACGCGCCGCT CCCTGCTCGG CGAGCTCGGG
AAGCTCCTCA AGGACATGAA CATGACCACC CTGTTCGTCA CCCACGACTA CACGGAAATT
CCCTATCTCG CCGATCGAGT GATGGTCCTC TATGAAGGGC GGATCATCAA GACGGGATCG
GTGCGGCAGG TCTTCGGGGA TCAGATCGTC GAGCGCAAGG TCTGGGCGCC CTGGGAGGAC
GCCGAGTAG
|
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| Protein sequence | MAEHLIAAKD LRLRLDGRDI FHIPEFSLQR GEVLALVGPN GSGKSSLLLT LALLQEPTEG
TVRFDGRPAG RDNALALRRR MALVFQEALL LDATVRRNLM IALRLRGVTG REAEQRANRW
LDRFGIAHLA SRKARRLSGG EAQRTSLARA FALEPEVLFL DEPFASLDYP TRRSLLGELG
KLLKDMNMTT LFVTHDYTEI PYLADRVMVL YEGRIIKTGS VRQVFGDQIV ERKVWAPWED
AE
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