Gene Sfum_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0019 
Symbol 
ID4461330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp30557 
End bp31330 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content59% 
IMG OID639700771 
Producthypothetical protein 
Protein accessionYP_844157 
Protein GI116747470 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0735022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.290854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA TACGGAATCT CTACGATCAC TTTCATGAGA AGGCGCAAAA GACGAAAATC 
GCATGTCTTT GCGTGGGATT GAGCTACACG GCCGTGATCA CCGACGATGG CGGGATGGGG
ATTGCCTACA CCTATGCGGA GGATACGCAT TGTTGCAGGA TGAACAGGAA TTACCGGGAT
TACGAGGGCG AACGGGCCAT CGAATTGCTG GAGGAAATCA GGAGCCCCGA TGCCTTGCGA
CGCAGTATGG GACTCGCCTG CGTCAACGCC ATGAACTACC ACGATGCGAG CGGATTTCCG
GAGGACTCAA CGGATCGTCT CTGGATGGAT TCGTTTGGCA TCGGCTCGGG AACCCGAGTC
GCGATGGTGG GCTTCTTCCG GCCTCTCATG AAGCTTTTCA GGGATCGTGG AGCGTTGGTG
GAAGCCCTGG ACGACTTTCA GGGCATTGGA GATCGGGACA GCTTTTACGG GAAATTGGAC
GGATGGGCGG AAGTCCTGCT GCTCACCTCG ACTTCCATTT TGAATCACAC CACGGAAGAG
ATTCTCGGCC GCATTGCCCC CGAAGTGAAG GTCGTCATGC TGGGACCGAG CACACCCATG
GTCGCCGATG CCTTCCGCCA CCTGCCCGTC CGGGTGCTGG CGGGAACCGT TCCCGTGGAC
AAGGAAGCCG TGCTGAGAGC CGTTCGCCAT GGGGCCGGCA CCCCCGTCAT CCATCGGTTC
AGCCGCAAGG CCTACGTGAC TCTGGCCGAT GGGCGGGTGC GTGCGCCTTG TTAG
 
Protein sequence
MQLIRNLYDH FHEKAQKTKI ACLCVGLSYT AVITDDGGMG IAYTYAEDTH CCRMNRNYRD 
YEGERAIELL EEIRSPDALR RSMGLACVNA MNYHDASGFP EDSTDRLWMD SFGIGSGTRV
AMVGFFRPLM KLFRDRGALV EALDDFQGIG DRDSFYGKLD GWAEVLLLTS TSILNHTTEE
ILGRIAPEVK VVMLGPSTPM VADAFRHLPV RVLAGTVPVD KEAVLRAVRH GAGTPVIHRF
SRKAYVTLAD GRVRAPC