| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4055 |
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| Symbol | gidB |
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| ID | 4280946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4833480 |
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| End bp | 4834121 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638136880 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_752719 |
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| Protein GI | 114565205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACCTA CGAGGCTTTC TGTGTTATCT GCCCAACTTA AAACCTATTT AGCTGAAATG
AATATGTCGG CCACTGAATT ACAACAAAAA CAATTAATAG GTTTTGTTGA AATGCTTGAT
AAATGGAATA AGGCTTATAA TCTCACCGCT GTTCGCGATC CTGAGCAAAT GTTAATCCGT
CATGTTATGG ACAGTTTGAC CGTTTCTCCT TATCTTGAAG GACAACGTTT TATCGATGTA
GGAACTGGCC CCGGTTTACC AGGGATCCCA TTAGCGATTA TGAATCCAGA TAAGCAGTTT
GTATTGCTAG ATAGTTTAGG TAAACGAATC CGTTTTCAAA AACAGGTTCA GTTTGAATTA
AAAATCAATA ATATTACTTC GGTAGAAAGT CGAGTTGAAG CTTATATCCC AGAGATTAAA
TTTGATGGTG TGTTAAGCCG AGCATTTGCA TCAATTCAAG ATATGCTCAG TTGGTGTCAT
CATTTACCGA CCGAGAAAGG CACTTTTTAT GCATTAAAAG GCCAGTTAAA TCAGCAAGAA
TTACAAGAGA TGCCAACAGG ATTTTCGTTG GTAGAAACCA TTGTATTGCA TGTACCAATG
TTAGATGAAC AGCGACATTT ATTAAAAATT GCTAAGCAAT AA
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| Protein sequence | MQPTRLSVLS AQLKTYLAEM NMSATELQQK QLIGFVEMLD KWNKAYNLTA VRDPEQMLIR
HVMDSLTVSP YLEGQRFIDV GTGPGLPGIP LAIMNPDKQF VLLDSLGKRI RFQKQVQFEL
KINNITSVES RVEAYIPEIK FDGVLSRAFA SIQDMLSWCH HLPTEKGTFY ALKGQLNQQE
LQEMPTGFSL VETIVLHVPM LDEQRHLLKI AKQ
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