| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3995 |
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| Symbol | |
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| ID | 4280886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4762991 |
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| End bp | 4763539 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136816 |
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| Product | transport-associated |
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| Protein accession | YP_752659 |
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| Protein GI | 114565145 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000543546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA CCACATTATC AGTAGTAATG AGCATTGTGT TAGGTTCAAT GGCATTTGGT
GCAAATGCAG CACAAGATTG GCAAGATGAT GCAAAAGATG CGTGGATCGA TGGTAAAGCT
GAAACCACAC TTTTGTTAAA TACTAATCTG AATTCATTTG ATATTAATAC CGACGTACAT
GATGGTAACG TGACCCTAAC AGGTAAAGTT AACAGCAGTG TTGATAAGTC ACTTGCCGGA
GAGTTAATTA GAAGCTTAGA TGGCGTGAAA GACGTTAACA ATGAGCTTTC GGTGATGAAG
CACAATGATA AAGACAGCAA GGATTTAAGT GAATCACTAA CCGATTCGAA AGTCGCTACC
GTAGTGAAAA CGCGATTACT ATTCTCCGCT GACGTGTCGG GCACCGATAT TAACGTTGAT
GTCGCACATG GTGTCGTGAC CTTAAAAGGT ACTGTGTCGA GCGATGCAGA ACGTGATTTA
GCATTAACCA TCGCTAAAAA TACCGATGAC GTTAAAGATG TAGTCGATGA GTTACGTGTA
ACAGGATAA
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| Protein sequence | MKKTTLSVVM SIVLGSMAFG ANAAQDWQDD AKDAWIDGKA ETTLLLNTNL NSFDINTDVH
DGNVTLTGKV NSSVDKSLAG ELIRSLDGVK DVNNELSVMK HNDKDSKDLS ESLTDSKVAT
VVKTRLLFSA DVSGTDINVD VAHGVVTLKG TVSSDAERDL ALTIAKNTDD VKDVVDELRV
TG
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