Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3974 |
Symbol | |
ID | 4280865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4737707 |
End bp | 4738999 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638136795 |
Product | hypothetical protein |
Protein accession | YP_752638 |
Protein GI | 114565124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGT CGCTGCAAAA CAGTCAACTT TCAGCATGGC GTAAACCTTA CCGTGGCATG CTGCGGTTGT GGTTGTTTGA CTTAGGCAGT GTCAGTTTTA TTGGTACCGC AGGATTAGGC CTAGTGTTAG GGCTGCTGTG TTTTATCAGC GGTAAAACCG AGGTTGTTAG CCTCGTTTTT TCCATGGCAA CACTGTCTAC TGCTGCGGCA ATTGCTTGGC AGTTAAATCG CTTAGCAGCA ATCGAGGTGA CCGGTCTAAT ACCTCATTAT CAAAAGCACG TGCTCATACA GGCGGCGACC ATCGCAGTCG GTATGTTATT GATACAACTA TTCGCCTGTA TTGGTTTTGC TGCTTACGAT GTCATCCCCA GACTACTGCT AGCCATTGTG GTCAGTTTGC TGTTTGTATG GGCTTGTTTA TGGCGCAGTA GCAGTTTTCA TTTATCGTTT TTATTATTCA TAACAGTGCC ATTTTTAGAT AAATTAGCGC TCACGATACC GACGTGGATG ATGCTAATAC TGATTGCTGG GCTATTGTCT TGGGTGATCC ATTTATGTCG TCAACTTAGC TGGAATAATG AGGCGCGTGT GGTGTACCTC AACGCCGTGC AAATGGGCTG GATGTGGCTG CCGAGCATAA AAGGATTCAC CTGGATTACT CGTGTTGAGC GGTTGTTTCA TCCGATGAAC TTTTTTATCG GCCCAGTGTT AACTATGATG CTGCTTTGTT TACCGTTGAT CACCCTTGGT TTAATACTGC TGTCGTGGCT ATTTGATATT GATGTACCAG CATTATTTTT GTTGGTGCAA TTTACCGTGA TCAGTTGTGC CATTGTTCAT TGGAGCCGAA TTCAGCGTTG GCGCGCGGCA GAAACGCTGT TTTTATTGCC TTGTTATAGC GGCTTGAGTG GATTGCGCGA TGCATTTTAC CGCAGCCAGT ATCGTTTCAT CGCTGTGTTA GTGGCTATGG TCAGCGTGCT AGGTTTTACC AATAGCTTGA TTGACCCGCA ATATGGCGGA TTATTTGTAC TGCATTTAGG TCTAAGCACT TTTTGGGGCT GTGCGATTAT GCTGGGAATG GGTTCGGCAA GCCGTAATAG CCTGCAAGCC ACAGCAGCAA TGCTATTAGT GTTACTCCAT TCGATATTGG TGTCGTTGAG TGTCGCCGCA GTGCGAGACG GTGACAGCTT ATGGGTATGG TTGCTTATGG ATGTGCCACT AATTATTGTT GGTGTTGGCG CATTAATTTG GGGTAAAAAA CGTTTGTGGC AGCATGGTGT TTTGGCCCCG TAA
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Protein sequence | MNQSLQNSQL SAWRKPYRGM LRLWLFDLGS VSFIGTAGLG LVLGLLCFIS GKTEVVSLVF SMATLSTAAA IAWQLNRLAA IEVTGLIPHY QKHVLIQAAT IAVGMLLIQL FACIGFAAYD VIPRLLLAIV VSLLFVWACL WRSSSFHLSF LLFITVPFLD KLALTIPTWM MLILIAGLLS WVIHLCRQLS WNNEARVVYL NAVQMGWMWL PSIKGFTWIT RVERLFHPMN FFIGPVLTMM LLCLPLITLG LILLSWLFDI DVPALFLLVQ FTVISCAIVH WSRIQRWRAA ETLFLLPCYS GLSGLRDAFY RSQYRFIAVL VAMVSVLGFT NSLIDPQYGG LFVLHLGLST FWGCAIMLGM GSASRNSLQA TAAMLLVLLH SILVSLSVAA VRDGDSLWVW LLMDVPLIIV GVGALIWGKK RLWQHGVLAP
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