| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3927 |
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| Symbol | |
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| ID | 4280818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4687124 |
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| End bp | 4687876 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638136748 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_752591 |
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| Protein GI | 114565077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.512494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA AAGTTTTTCT CATTAATTTA GATAACAGTA CTGAACGATT TACGTTCATG
GATGAACAAC TAAAACAATT AGGTGTCGAA TACCAACGTA TTTCCGCCGT TTACGGTAAA
GATTTGCACG ATACCGAGAT TGCGAAAGTG TATGATCCGC AAACAAACCT TCAAAAATAC
GACAAAAAGC TTAATTTGGG TGAAATTGGC TGCTACCTAA GCCATGTCCA ATGTTGGCAA
ATGATTATTG AACAACAGTT AGATTACGCT TTAATTCTTG AGGATGACTC AATCCTAGAT
CCTGCGTTAA TGACGGTGAT ACAACATATT AATAATCTTT CTGCTGATTG GGATTACATT
AAATTGTGTC ACGGGCGTAA ACCCAAAGGT ATTGTAAAAT CGATTGTGCT TGATGATCGC
TTTAGCTTAT CGACGTGTTT AAAATTACCA GCTTCTACCC GCGGCCAATG CGTGTCATTG
GCTGGAGCAC AAAAATTATT AGCAACGGCA TACCCTATTG CCCGTCCTGT TGATATCGAT
ATTCAATTTT GGTTCGAAAA ACAATTACGT TGCTTTGTTG TAAGACCTTT TCCTGTGATT
GGAACCGATT TAGACAGTGA TATTAATCGA CAAGGTAGAC GTACTAATGT TGAACGTCAT
CATTTATTGC GTATTTGGCA AAAAATGAAG TTCGAGTTGA ATTTATTGAA ATATAAACAA
CAATTGCCAT CACTTCCCAA AATACAAAAA TAG
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| Protein sequence | MKFKVFLINL DNSTERFTFM DEQLKQLGVE YQRISAVYGK DLHDTEIAKV YDPQTNLQKY
DKKLNLGEIG CYLSHVQCWQ MIIEQQLDYA LILEDDSILD PALMTVIQHI NNLSADWDYI
KLCHGRKPKG IVKSIVLDDR FSLSTCLKLP ASTRGQCVSL AGAQKLLATA YPIARPVDID
IQFWFEKQLR CFVVRPFPVI GTDLDSDINR QGRRTNVERH HLLRIWQKMK FELNLLKYKQ
QLPSLPKIQK
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