Gene Sfri_3875 details

Gene Information

• Locus tag: Sfri_3875
• ID: 4280766
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 4627162
• End bp: 4627941
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638136696
• Product: hypothetical protein
• Protein accession: YP_752539
• Protein GI: 114565025

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTCAA TAAACATGAA CTTCGATTTT TGCCTATCAA ACCGCAACCA TTATGCCCGC 
GCCTTTTGTT GTGCAATGGC TACGATGATG TGCTTGATGA CATCCTCGTC AGCGTTCGCC 
ACGGCAGAAT ACCAGCCGAC TGCAGGGGTT GATGTTGCTT GGGAAAATAA TTATGTCACT 
CAAGGTCGTA ATAATTTAGA GCATGGCGGT ATTGCATGGG CAGTGGCAAA TATTGAACAA 
AACGACCTAG CTGTTTATGC CATTGTAGGG CGAGCAGACC AAGTGAATTA TGTGGAATGG 
AACCTAGGGC TAGAATACAC CTTACATCTC GCTAATAATA TTGATGCCAC AGTAGGCTAC 
CAGCGCTTAG AATTTTATGG CGATGAGCGC TGTTCCGATA ATGAATTTTT CGGCGCGTTA 
ACGGTTAATG GATTAACTTG GTTTGTACCC GCTGTTAACT ACACTTATGC AACCGAAGCT 
GGCGGCTATT TCATTGAACT GAGCATACAT AGCCCATGGG AAATCAATCA ACACTTCACT 
TTGACACCTT ACATTGTTCA GGGATTTGAT TTTCAATACA GCAGTGAAGA ACACAACGGC 
GCTAACCATT TCCAATTTGG ACTAGAAGCC GAACAAAAGT TGAATGATTC AATGGCATTA 
TCTGCACACA TTAGCCACAG CATCGCTCAA GGAGATATTA AGCAACAAGC CAGTGCCGAT 
GATATTCAGG GCAGTTTAGA TCAAACCTAT GCAGGGGTGC ATTTCAAACT GAGTTTTTAA 

 

Protein sequence

MSSINMNFDF CLSNRNHYAR AFCCAMATMM CLMTSSSAFA TAEYQPTAGV DVAWENNYVT 
QGRNNLEHGG IAWAVANIEQ NDLAVYAIVG RADQVNYVEW NLGLEYTLHL ANNIDATVGY 
QRLEFYGDER CSDNEFFGAL TVNGLTWFVP AVNYTYATEA GGYFIELSIH SPWEINQHFT 
LTPYIVQGFD FQYSSEEHNG ANHFQFGLEA EQKLNDSMAL SAHISHSIAQ GDIKQQASAD 
DIQGSLDQTY AGVHFKLSF